BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZD10FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1253 1503 0.0 >3x_Contig1253 Length = 5628 Score = 1503 bits (758), Expect = 0.0 Identities = 809/824 (98%), Gaps = 2/824 (0%) Strand = Plus / Plus Query: 88 taccagaaccggcagaagccggtggagttctgggttcaaattgaatataaacattttcag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1560 taccagaaccggcagaagccggtggagttctgggttcaaattgaatataaacattttcag 1619 Query: 148 acgaagaatttataaccggatgagacttgggagtaaggatgagtgatccgttcatatcga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1620 acgaagaatttataaccggatgagacttgggagtaaggatgagtgatccgttcatatcga 1679 Query: 208 tcggccgttgaagaatatgaggagaagtatatttcattttccctgatatattgtcctttg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1680 tcggccgttgaagaatatgaggagaagtatatttcattttccctgatatattgtcctttg 1739 Query: 268 aagttatatgttttaatatgacatgtgtattttgttctttgctggagtcaacagcttcaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1740 aagttatatgttttaatatgacatgtgtattttgttctttgctggagtcaacagcttcaa 1799 Query: 328 tgtcaaaaagaacagtttgagggagtccaaagactcttctttcagttaaaatatcatcat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1800 tgtcaaaaagaacagtttgagggagtccaaagactcttctttcagttaaaatatcatcat 1859 Query: 388 attcgttggattgagtttcaggtttcctggataacatctttgaaacccgaaagacgtatg 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1860 attcgttggattgagtttcaggtttcctggataacatctttgaaacccgaaagacgtatg 1919 Query: 448 gtcttagtgcagctagcttccataattctgtctctgacaaccccacattttttatcttgt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1920 gtcttagtgcagctagcttccataattctgtctctgacaaccccacattttttatcttgt 1979 Query: 508 ctatccagttcttgtcctcagttgtcaagggtatttcaatattagcaatagaagttacat 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1980 ctatccagttcttgtcctcagttgtcaagggtatttcaatattagcaatagaagttacat 2039 Query: 568 gcgattttgagggcttgaaattagtctgaaagccataattattcacagaaaaattcttag 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2040 gcgattttgagggcttgaaattagtctgaaagccataattattcacagaaaaattcttag 2099 Query: 628 atatgaattccacagtattattaccaaaagagtttacatttnttggtcggcaaatgcttt 687 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2100 atatgaattccacagtattattaccaaaagagtttacattt-ttggtcggcaaatgcttc 2158 Query: 688 caaaacagcgacttcgatgatcttaatgtccaactacataaaagattgtagacatttctg 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2159 caaaacagcgacttcgatgatcttaatgtccaactacataaaagattgtagacatttctg 2218 Query: 748 gaaactggttttnttgagctaatcaatagagacttccacgtcattttcacattcaa-tcc 806 |||||||||||| ||||||||||||||||||||| ||||||||||| |||| || || Sbjct: 2219 gaaactggtttttttgagctaatcaatagagactcccacgtcatttcaacatcaaattca 2278 Query: 807 anaaatggtttgatgatcgggtacatcatacagtacagctcaggcttttgaagtttcgat 866 | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2279 aaaaatggtttgatgatcgggtacatcatacagtacagctcaggctttgaaagtttcgat 2338 Query: 867 gcccattctatcaatagtagcatagtatactctcgcacccaaaa 910 ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2339 gccatttctatcaatagtagcatagtatactctcgcacccaaaa 2382 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6719 Number of Sequences: 1807 Number of extensions: 6719 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)