BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZD11FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1430 1350 0.0 >3x_Contig1430 Length = 7411 Score = 1350 bits (681), Expect = 0.0 Identities = 753/770 (97%), Gaps = 7/770 (0%) Strand = Plus / Minus Query: 87 acggatcaagcaagcaggaaaatggcagttataatgatacgtctatcttgaattctttaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7093 acggatcaagcaagcaggaaaatggcagttataatgatacgtctatcttgaattctttaa 7034 Query: 147 atttgaaggaggaaataggtaatttggttttatcaattgatacacttaaaaagcagctgg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7033 atttgaaggaggaaataggtaatttggttttatcaattgatacacttaaaaagcagctgg 6974 Query: 207 agcttctacattatttgatattgaaggcggagctaactaataatcaaacgagactgatat 266 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6973 agcttctacatcatttgatattgaaggcggagctaactaataatcaaacgagactgatat 6914 Query: 267 tgttgaagaaatcggaaagaacacttagaagagaactggaatacaaagaattgcttaaac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6913 tgttgaagaaatcggaaagaacacttagaagagaactggaatacaaagaattgcttaaac 6854 Query: 327 aacagcatatggttcatgagaacgctaatattttatatg-gcagggcaaaactttgtatt 385 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6853 aacagcatatggttcatgagaacgctaatattttatatgcgcagggcaaaactttgtatt 6794 Query: 386 aaatcttatttgactgatgtgtctcttgaagatggtaaagaaactgtttactatttgata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6793 aaatcttatttgactgatgtgtctcttgaagatggtaaagaaactgtttactatttgata 6734 Query: 446 aatgtacagcatatcttcaacaaccagttagttacgtgggatatacctcgaagattcagc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6733 aatgtacagcatatcttcaacaaccagttagttacgtgggatatacctcgaagattcagc 6674 Query: 506 gaattctacaggttgaactcctacttgaagaagaagtatccgggggtggtaagctatttg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6673 gaattctacaggttgaactcctacttgaagaagaagtatccgggggtggtaagctatttg 6614 Query: 566 caaaattctaatggcttcccggagagagtaaaaatgtcattaaagtatcatgtatcgaaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6613 caaaattctaatggcttcccggagagagtaaaaatgtcattaaagtatcatgtatcgaaa 6554 Query: 626 acattattgtatgaagaaagaagaaaaagactcgaatactacatgcnaggaattgttaaa 685 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 6553 acattattgtatgaagaaagaagaaaaagactcgaatactacatgc-aggaattgttaaa 6495 Query: 686 aatacgtgaggtttgtcaagatgaatactttagaaaatatttgacggatgtttccaacac 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6494 aatacgtgaggtttgtcaagatgaatactttagaaaatatttgacggatgtttccaacac 6435 Query: 746 tttttaggtttaaagagaatttggaagaaggatgntgaggataagaaaagatcaaatggt 805 |||| ||| |||||||||||||||||||| |||| ||||||||||| |||||| |||||| Sbjct: 6434 ttttaagg-ttaaagagaatttggaagaa-gatgttgaggataagagaagatc-aatggt 6378 Query: 806 tcttttaaaaacngaccacaccggttgggaaaatttacaaatgtatcagc 855 ||||||||| || ||| |||||| | ||| || |||||||||||||||| Sbjct: 6377 tcttttaaagacggacaacaccg--ttggagaagttacaaatgtatcagc 6330 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9387 Number of Sequences: 1807 Number of extensions: 9387 Number of successful extensions: 92 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)