BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZD12FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig968 1572 0.0 >3x_Contig968 Length = 5045 Score = 1572 bits (793), Expect = 0.0 Identities = 828/836 (99%), Gaps = 3/836 (0%) Strand = Plus / Minus Query: 86 ccgcctggctgtaaattctcatatttcaacagaaaagtgggtccgccgtttaacggttct 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3326 ccgcctggctgtaaattctcatatttcaacagaaaagtgggtccgccgtttaacggttct 3267 Query: 146 ctaaatggcagtaatggggtttttattgtcaattgatccatttgatggttgttggctttt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3266 ctaaatggcagtaatggggtttttattgtcaattgatccatttgatggttgttggctttt 3207 Query: 206 ttttttactttctctgatgatagtcattagcatctcttatcaaccggtttatcaaagcac 265 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3206 ttttttactttcactgatgatagtcattagcatctcttatcaaccggtttatcaaagcac 3147 Query: 266 gtcagtcacctttatattctcatttgcagacatctgccggttgcatttcgaagaaatatg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3146 gtcagtcacctttatattctcatttgcagacatctgccggttgcatttcgaagaaatatg 3087 Query: 326 aaaatttaagaaatgaaaaaatcaaaaaattgactgtaccccatcagaaattcaaataga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3086 aaaatttaagaaatgaaaaaatcaaaaaattgactgtaccccatcagaaattcaaataga 3027 Query: 386 gtgatacgaagagtacagtatatatgattgcgcaggttaacctgtctggtaactataact 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3026 gtgatacgaagagtacagtatatatgattgcgcaggttaacctgtctggtaactataact 2967 Query: 446 gggaataatatcttcacccaatttcgagaaataaacttttcgaataaaagcagttggaat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2966 gggaataatatcttcacccaatttcgagaaataaacttttcgaataaaagcagttggaat 2907 Query: 506 tttggtcccttctttttgcaacgaaagaagtaacataatatagaagaagcagcttacatt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2906 tttggtcccttctttttgcaacgaaagaagtaacataatatagaagaagcagcttacatt 2847 Query: 566 tacagataatgtcgacggagactttggaaatatatcgcaaggcattgaattttaacgtta 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2846 tacagataatgtcgacggagactttggaaatatatcgcaaggcattgaattttaacgtta 2787 Query: 626 tagcgcgttatgatcctaagattaaacaactactttttcacactccgcatgctacggtgt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2786 tagcgcgttatgatcctaagattaaacaactactttttcacactccgcatgctacggtgt 2727 Query: 686 ataagtggggcgatgataattggaacaagttagaatatcaaggcgtgttggcgatatatc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2726 ataagtggggcgatgataattggaacaagttagaatatcaaggcgtgttggcgatatatc 2667 Query: 746 ttcgagatgtcggtgacaaagaagcaattctaccagaagtgagtagttatgatgatacta 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2666 ttcgagatgtcggtgacaaagaagcaattctaccagaagtgagtagttatgatgatacta 2607 Query: 806 taacagcccaacattctgaagctaatactccacacgtattgactggtcacgacatctaca 865 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2606 taacaggccaacaatctgaagctaatactccacacgtattgactggtcacgacatctaca 2547 Query: 866 tttatggactaat-attatgtaacagaattaat-ctgataacttttctttgncgat 919 |||||||||||| |||||| |||||||||||| ||||||||||||||||| |||| Sbjct: 2546 attatggactaataattatg-aacagaattaatcctgataacttttctttggcgat 2492 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8121 Number of Sequences: 1807 Number of extensions: 8121 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)