BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZD12FM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig968                                                         1572   0.0  

>3x_Contig968 
          Length = 5045

 Score = 1572 bits (793), Expect = 0.0
 Identities = 828/836 (99%), Gaps = 3/836 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ccgcctggctgtaaattctcatatttcaacagaaaagtgggtccgccgtttaacggttct 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3326 ccgcctggctgtaaattctcatatttcaacagaaaagtgggtccgccgtttaacggttct 3267

                                                                        
Query: 146  ctaaatggcagtaatggggtttttattgtcaattgatccatttgatggttgttggctttt 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3266 ctaaatggcagtaatggggtttttattgtcaattgatccatttgatggttgttggctttt 3207

                                                                        
Query: 206  ttttttactttctctgatgatagtcattagcatctcttatcaaccggtttatcaaagcac 265
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3206 ttttttactttcactgatgatagtcattagcatctcttatcaaccggtttatcaaagcac 3147

                                                                        
Query: 266  gtcagtcacctttatattctcatttgcagacatctgccggttgcatttcgaagaaatatg 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3146 gtcagtcacctttatattctcatttgcagacatctgccggttgcatttcgaagaaatatg 3087

                                                                        
Query: 326  aaaatttaagaaatgaaaaaatcaaaaaattgactgtaccccatcagaaattcaaataga 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3086 aaaatttaagaaatgaaaaaatcaaaaaattgactgtaccccatcagaaattcaaataga 3027

                                                                        
Query: 386  gtgatacgaagagtacagtatatatgattgcgcaggttaacctgtctggtaactataact 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3026 gtgatacgaagagtacagtatatatgattgcgcaggttaacctgtctggtaactataact 2967

                                                                        
Query: 446  gggaataatatcttcacccaatttcgagaaataaacttttcgaataaaagcagttggaat 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2966 gggaataatatcttcacccaatttcgagaaataaacttttcgaataaaagcagttggaat 2907

                                                                        
Query: 506  tttggtcccttctttttgcaacgaaagaagtaacataatatagaagaagcagcttacatt 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2906 tttggtcccttctttttgcaacgaaagaagtaacataatatagaagaagcagcttacatt 2847

                                                                        
Query: 566  tacagataatgtcgacggagactttggaaatatatcgcaaggcattgaattttaacgtta 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 tacagataatgtcgacggagactttggaaatatatcgcaaggcattgaattttaacgtta 2787

                                                                        
Query: 626  tagcgcgttatgatcctaagattaaacaactactttttcacactccgcatgctacggtgt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2786 tagcgcgttatgatcctaagattaaacaactactttttcacactccgcatgctacggtgt 2727

                                                                        
Query: 686  ataagtggggcgatgataattggaacaagttagaatatcaaggcgtgttggcgatatatc 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2726 ataagtggggcgatgataattggaacaagttagaatatcaaggcgtgttggcgatatatc 2667

                                                                        
Query: 746  ttcgagatgtcggtgacaaagaagcaattctaccagaagtgagtagttatgatgatacta 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 ttcgagatgtcggtgacaaagaagcaattctaccagaagtgagtagttatgatgatacta 2607

                                                                        
Query: 806  taacagcccaacattctgaagctaatactccacacgtattgactggtcacgacatctaca 865
            |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 taacaggccaacaatctgaagctaatactccacacgtattgactggtcacgacatctaca 2547

                                                                    
Query: 866  tttatggactaat-attatgtaacagaattaat-ctgataacttttctttgncgat 919
             |||||||||||| |||||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 2546 attatggactaataattatg-aacagaattaatcctgataacttttctttggcgat 2492


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8121
Number of Sequences: 1807
Number of extensions: 8121
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)