BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZE02RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1251 1528 0.0 >3x_Contig1251 Length = 6331 Score = 1528 bits (771), Expect = 0.0 Identities = 849/870 (97%), Gaps = 4/870 (0%) Strand = Plus / Minus Query: 40 gcttagatt-aatatcttcaatcttagatcccaagctggaagagtgagcgggntactagc 98 ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 3169 gcttagattcaatatcttcaatcatagatcccaagctggaagagtgagcggg-tactagc 3111 Query: 99 tgttcaacagtagatacgttttgcaattttacggtcttggaattttctctagttagatta 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3110 tgttcaacagtagatacgttttgcaattttacggtcttggaattttctctagttagatta 3051 Query: 159 ccggacattgatagttgttgttcttttgataggttttccaagtgcaagatctctcgtgnt 218 ||||||| ||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 3050 ccggacaatgatagttgttgttcttttgataggttttccaagtgcaagatcaccgttgta 2991 Query: 219 ttgacattatatgtgacttccataccctcttcatcgtgggtggcagatatgacgtggata 278 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2990 gtgacattatatgtgacttccataccctcttcatcgtgggtggcagatatgacgtggata 2931 Query: 279 ctgtcccatttagaatcatctgattcagctttcttgaaaagaatgactcccgcgaaatca 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2930 ctgtcccatttagaatcatctgattcagctttcttgaaaagaatgactcccgcgaaatca 2871 Query: 339 gttgattcatcaacgtcccagagatacgttgaagtgtaaccaccctcgtagtataggtcc 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2870 gttgattcatcaacgtcccagagatacgttgaagtgtaaccaccctcgtagtataggtcc 2811 Query: 399 ctatacaactcgaaagaattgttgcatgcaacttctagttctctcaatggctcactggga 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2810 ctatacaactcgaaagaattgttgcatgcaacttctagttctctcaatggctcactggga 2751 Query: 459 aaaggactttctttcaaatcttcggcactcaattcagggaagtactggttagaccacggt 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2750 aaaggactttctttcaaatcttcggcactcaattcagggaagtactggttagaccacggt 2691 Query: 519 gacctatgagaatcgatgtcacggttgtagtcgcaacataagaattctttgttgttagca 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2690 gacctatgagaatcgatgtcacggttgtagtcgcaacataagaattctttgttgttagca 2631 Query: 579 tcggtatccttcttaatggtcaatgggatatcaattgaggaaagtaatccttctgcgatt 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2630 tcggtatccttcttaatggtcaatgggatatcaattgaggaaagtaatccttctgcgatt 2571 Query: 639 tcaggctccaacgcaataaggttctgtaaatgggttttcacctttgttggatccaatctg 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2570 tcaggctccaacgcaataaggttctgtaaatgggttttcacctttgttggatccaatctg 2511 Query: 699 tataaaagctcgcaagcagcatcatatttctcgtccacagacattctagttccgtatctt 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2510 tataaaagctcgcaagcagcatcatatttctcgtccacagacattctagttccgtatctt 2451 Query: 759 cagtatatttacaactagttaccacgctcaaatgag-tttcttcagtttgcttgatgtat 817 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 2450 cagtatatttacaactagttaccacgctc-aatgagttttcttcagtttgcttgatgtat 2392 Query: 818 ttacatttcccctttctactcctttaatgattcctttcgtaggttttctttcaatacgaa 877 |||||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 2391 ttacatttaccctttctactcctttaatgatttctttcgtagttttcctttcaatacgat 2332 Query: 878 cgatgaaatttttctattgacagactttgc 907 |||||| ||||||||||||| |||| |||| Sbjct: 2331 cgatgatatttttctattgagagacattgc 2302 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6919 Number of Sequences: 1807 Number of extensions: 6919 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)