BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZE04FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1652 1217 0.0 >3x_Contig1652 Length = 14842 Score = 1217 bits (614), Expect = 0.0 Identities = 649/657 (98%), Gaps = 4/657 (0%) Strand = Plus / Minus Query: 87 taatttcttcacaatttctacgcttgcatcgatctcctctacaataccagtcgcagctat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11935 taatttcttcacaatttctacgcttgcatcgatctcctctacaataccagtcgcagctat 11876 Query: 147 tctgaaacttccagttgtatcactgttagcaactatttgaacaccacagaaagtggtatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11875 tctgaaacttccagttgtatcactgttagcaactatttgaacaccacagaaagtggtatt 11816 Query: 207 tggcgagcacaagggaccatagaaagaagctgtacaataagcatgttctggagtatactt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11815 tggcgagcacaagggaccatagaaagaagctgtacaataagcatgttctggagtatactt 11756 Query: 267 caacattctagtcctggttctagagtcactagtggtgtatattggtagagtttggaaacg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11755 caacattctagtcctggttctagagtcactagtggtgtatattggtagagtttggaaacg 11696 Query: 327 tctccaaccaagagataaaactaaaggatcatttgtcttgagaatctttttgtgccaacg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11695 tctccaaccaagagataaaactaaaggatcatttgtcttgagaatctttttgtgccaacg 11636 Query: 387 atgtcttctgactcttgcattaataattccgaacttcaattctgtgggaagaagacctcc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11635 atgtcttctgactcttgcattaataattccgaacttcaattctgtgggaagaagacctcc 11576 Query: 447 cataattactggatactttgggttgaaattttcgatgaattccataggaaccttatcgaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11575 cataattactggatactttgggttgaaattttcgatgaattccataggaaccttatcgaa 11516 Query: 507 gacaatacgaacataagacccagctttcataccttcgatttgttgcctttgttcaggagt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11515 gacaatacgaacataagacccagctttcataccttcgatttgttgcctttgttcaggagt 11456 Query: 567 catagattccagttcggctttattgatttctaattgtttagcaatcttagccttctgtaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11455 catagattccagttcggctttattgatttctaattgtttagcaatcttagccttctgtaa 11396 Query: 627 ttcgtaccaggtatcgtattcattttcagggtcttctccaaagttgtcttctttcttcca 686 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 11395 ttcgtaccaggtatcgtattcattttcagggtcttctccaaagttgtc-tccttcttcca 11337 Query: 687 tttcgaattgtaacctttattttcttttttttttgcgggcattcaattcacgctctt 743 ||||||||||||||||| |||| | ||||||||| |||||||||||||||||||| Sbjct: 11336 tttcgaattgtaaccttaattt--ctctttttttgc-ggcattcaattcacgctctt 11283 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9270 Number of Sequences: 1807 Number of extensions: 9270 Number of successful extensions: 138 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)