BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZE04RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig805 1185 0.0 >3x_Contig805 Length = 3584 Score = 1185 bits (598), Expect = 0.0 Identities = 736/777 (94%), Gaps = 4/777 (0%) Strand = Plus / Minus Query: 48 attaataaacttttatccatagaagtgttatgaaagaaccctattaaggatctgatgcat 107 |||| |||||||||||| ||||||||||||||| ||||| |||||||||| |||||||| Sbjct: 1848 attattaaacttttatcaatagaagtgttatgatagaacaatattaaggatatgatgcat 1789 Query: 108 tctatgattctgacaacttgaaacttggtgaagataaaattgatgatcttctctcgacca 167 | ||||||| ||| || ||| || |||||||||||| |||||||| | |||| | | ||| Sbjct: 1788 tatatgattatgaaaaattgtaaattggtgaagatataattgatgttattcttttgtcca 1729 Query: 168 acattaatttggttgggattcgaagttgttgcatttttcagaagtgcagcctcatgcttg 227 |||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| || Sbjct: 1728 acattaatttggttgggaatcgaagttgttgcatttttcagaagtgcagcattatgcatg 1669 Query: 228 tcttgtttgtcttggatcttgatgaaccttgaaagcctttctaagtctgccttcaaagaa 287 || |||||||||||| | ||||||| ||||| |||| ||||||||||||||||||||||| Sbjct: 1668 tcatgtttgtcttggtttttgatgatccttgtaagcatttctaagtctgccttcaaagaa 1609 Query: 288 tttgagcaaatatgagaaattataggacaaccggggaaattctctggttccaattttttt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 tttgagcaaatatgagaaattataggacaaccggggaaattctctggttccaattttttt 1549 Query: 348 agccctgactcatgatgtatattaagtataatgtaccaataatgaaacaagaaggtggta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1548 agccctgactcatgatgtatattaagtataatgtaccaataatgaaacaagaaggtggta 1489 Query: 408 agaacctgaggattctgtaggtatgagatcatgatggggaaagctttttttgtttcttgt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1488 agaacctgaggattctgtaggtatgagatcatgatggggaaagctttttttgtttcttgt 1429 Query: 468 gtcataacatcaccatattcagtattaccaaactcttctatgatgtcctgtgtatactta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1428 gtcataacatcaccatattcagtattaccaaactcttctatgatgtcctgtgtatactta 1369 Query: 528 gattgaggtacaccttcatcaagaatagcaaattgcttacttctgcaaggtagtaaactc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1368 gattgaggtacaccttcatcaagaatagcaaattgcttacttctgcaaggtagtaaactc 1309 Query: 588 actccttctatattttttatgtcaaatcttcctctggaaatgaacttcacaacttcgaag 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1308 actccttctatattttttatgtcaaatcttcctctggaaatgaacttcacaacttcgaag 1249 Query: 648 tcatagtgtagttcatcattcanatagcataatgcaaatgcaatgattttacctatttaa 707 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 1248 tcatagtgtagttcatcattcaaatagcataatgcaaatgcaatgattttacctattaac 1189 Query: 708 cgtgttaatagtgcagtattacgttttagaaactgtagaatggtagactcagtatttggt 767 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1188 ggtgttaatagtgcagtataacgttttagaaactgtagaatggtagactcagta-ttggt 1130 Query: 768 gtttggccatttgagcagcttgtttttcttaccctctaaaagttccggcccttttct 824 |||| |||||||||||||| ||| ||||||| |||||||||| |||| || |||||| Sbjct: 1129 gttt-gccatttgagcagc-tgtatttctta-cctctaaaaggtccgccctttttct 1076 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8107 Number of Sequences: 1807 Number of extensions: 8107 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)