BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZE11FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1511 1522 0.0 >3x_Contig1511 Length = 8569 Score = 1522 bits (768), Expect = 0.0 Identities = 814/824 (98%), Gaps = 4/824 (0%) Strand = Plus / Minus Query: 87 caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7385 caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 7326 Query: 147 aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7325 aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 7266 Query: 207 gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7265 gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 7206 Query: 267 cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7205 cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 7146 Query: 327 ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7145 ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 7086 Query: 387 atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7085 atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 7026 Query: 447 aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7025 aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 6966 Query: 507 agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6965 agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 6906 Query: 567 tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6905 tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 6846 Query: 627 tctttgcaactcaagtgcagatcggggggggggggcgtaaatcctacacccctcctgata 686 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6845 tctttgcaactcaagtgcagatcgg-gggggggggcgtaaatcctacacccctcctgata 6787 Query: 687 tctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagct 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6786 tctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagct 6727 Query: 747 gcaaatcaaatctcgtcatgcactttcaaagggagactagacttgacctgaccagtgtat 806 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6726 gcaaatcaaatctcgtcatgcactttc-aagggagactagacttgacctgaccagtgtat 6668 Query: 807 tgacccaaagcggttttataagaaggcattactctgaaaagtatttacaaaaacaactct 866 ||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 6667 tgacccaaagcgg-tttagaagaaggcattactctgaaaggtatttacaaaaacaactct 6609 Query: 867 cgccatgtattaaagcgggaaaaaccttttacgtcgcgaatagg 910 ||||||||| |||||||||||| |||| | ||| |||||||||| Sbjct: 6608 cgccatgta-taaagcgggaaagacctctaacggcgcgaatagg 6566 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7820 Number of Sequences: 1807 Number of extensions: 7820 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)