BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZE11FM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1511                                                        1522   0.0  

>3x_Contig1511 
          Length = 8569

 Score = 1522 bits (768), Expect = 0.0
 Identities = 814/824 (98%), Gaps = 4/824 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7385 caaatcaacattcgcattctgtttcctaatttcgattttcgcttggatttcttgcggagt 7326

                                                                        
Query: 147  aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7325 aatcaaggaatacaaactacatacctcgatggaacgcaaatagtgatgtggaccaccgtt 7266

                                                                        
Query: 207  gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7265 gcaatttttcaccttcaacattgttggagaactaacatatagatacagagatattcataa 7206

                                                                        
Query: 267  cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7205 cctactctaacaaaaatgctccgaaacgcacgaaaactattcttcctaactttttttttc 7146

                                                                        
Query: 327  ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7145 ctatctgtataattgaaagtaccctgatcaacgttaagccagccaaactatcgcccgtaa 7086

                                                                        
Query: 387  atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7085 atcttatgttagtttattcatgcatagcactagacataacaatttgacggtccatgtcaa 7026

                                                                        
Query: 447  aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7025 aaaacgaatcaactccaaaaggaacaggttttagtgtatacagtgcaggtgcagtagtgc 6966

                                                                        
Query: 507  agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6965 agtagtgcatctaagctcaacaaaaactttaaaatttcctaagctgatgttttttcttgt 6906

                                                                        
Query: 567  tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6905 tttgtactgacttgttagtaagaaaaaaaataactaccggaaggttttgctttgccagct 6846

                                                                        
Query: 627  tctttgcaactcaagtgcagatcggggggggggggcgtaaatcctacacccctcctgata 686
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6845 tctttgcaactcaagtgcagatcgg-gggggggggcgtaaatcctacacccctcctgata 6787

                                                                        
Query: 687  tctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagct 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6786 tctcatacgcccacggtccacttcagcagttctacgttggatcaaaaatcagagagagct 6727

                                                                        
Query: 747  gcaaatcaaatctcgtcatgcactttcaaagggagactagacttgacctgaccagtgtat 806
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6726 gcaaatcaaatctcgtcatgcactttc-aagggagactagacttgacctgaccagtgtat 6668

                                                                        
Query: 807  tgacccaaagcggttttataagaaggcattactctgaaaagtatttacaaaaacaactct 866
            ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6667 tgacccaaagcgg-tttagaagaaggcattactctgaaaggtatttacaaaaacaactct 6609

                                                        
Query: 867  cgccatgtattaaagcgggaaaaaccttttacgtcgcgaatagg 910
            ||||||||| |||||||||||| |||| | ||| ||||||||||
Sbjct: 6608 cgccatgta-taaagcgggaaagacctctaacggcgcgaatagg 6566


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7820
Number of Sequences: 1807
Number of extensions: 7820
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)