BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC24ZF05RM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1680                                                        1481   0.0  

>3x_Contig1680 
          Length = 12597

 Score = 1481 bits (747), Expect = 0.0
 Identities = 852/878 (97%), Gaps = 7/878 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   ttaagttgcttgaagacttgtcgcctgaataatattccaatgcgtctgatcatttctgca 106
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6802 ttaagttgcttgaagacttgacgcctgaataatattccaatgcgtctgatcatttctgca 6743

                                                                        
Query: 107  tttttgcctcagttatgaacaatgtcagagattctataattatcgtatttgcatctatat 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6742 tttttgcctcagttatgaacaatgtcagagattctataattatcgtatttgcatctatat 6683

                                                                        
Query: 167  cattattaactcaattagcagccctcaattttaatgtttcgatcagtttcctttcactgt 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6682 cattattaactcaattagcagccctcaattttaatgtttcgatcagtttcctttcactgt 6623

                                                                        
Query: 227  tttgtatcaattggtctatatatacgccattatacatgtaaatgtagaattctctttaaa 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6622 tttgtatcaattggtctatatatacgccattatacatgtaaatgtagaattctctttaaa 6563

                                                                        
Query: 287  gttagatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaag 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6562 gttagatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaag 6503

                                                                        
Query: 347  tgtgcggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgagg 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6502 tgtgcggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgagg 6443

                                                                        
Query: 407  acagaataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggaga 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6442 acagaataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggaga 6383

                                                                        
Query: 467  aagaacggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaactt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6382 aagaacggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaactt 6323

                                                                        
Query: 527  acaacttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgtagg 586
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6322 acaacttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgta-g 6264

                                                                        
Query: 587  aagcggttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtc 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6263 aagcggttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtc 6204

                                                                        
Query: 647  tcaagtcgaagttcttcttgatgattttcaataacttcttcatctgggatggtagcggta 706
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6203 tcaagtcgaagttcttcttgatga-tttcaataacttcttcatctgggatggtagcggta 6145

                                                                        
Query: 707  ccataggtgtcgacatgcaaagattaaggttcagcgataccgatagcgtaagagaattgg 766
            |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 6144 ccataggtgtcgacatgcaaggataaaggttcagcgataccgatagcgtaagagaattgg 6085

                                                                        
Query: 767  acttgaactctcttacagatcccagcgtggaccaaagacttagc-acccatctagcggng 825
            |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
Sbjct: 6084 acttgaactctcttacagataccagcgtggaccaaagacttagcaacccatctagcggcg 6025

                                                                        
Query: 826  ttagcacgcgg-accgtcgacctttgaattattccttaccggagaaagc-ccccccccga 883
            | |||| |||| || ||||||| ||| | || ||||||||||||||||| || || ||||
Sbjct: 6024 taagca-gcggaacggtcgacc-ttggagtaatccttaccggagaaagcaccaccaccga 5967

                                                  
Query: 884  ccggcgaagccccaccgttagcatcggcgattatcttt 921
            | |  ||||| ||||||| ||||||| |||| ||||||
Sbjct: 5966 cagcagaagcaccaccgtaagcatcgacgataatcttt 5929


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7396
Number of Sequences: 1807
Number of extensions: 7396
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)