BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZF05RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1680 1481 0.0 >3x_Contig1680 Length = 12597 Score = 1481 bits (747), Expect = 0.0 Identities = 852/878 (97%), Gaps = 7/878 (0%) Strand = Plus / Minus Query: 47 ttaagttgcttgaagacttgtcgcctgaataatattccaatgcgtctgatcatttctgca 106 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6802 ttaagttgcttgaagacttgacgcctgaataatattccaatgcgtctgatcatttctgca 6743 Query: 107 tttttgcctcagttatgaacaatgtcagagattctataattatcgtatttgcatctatat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6742 tttttgcctcagttatgaacaatgtcagagattctataattatcgtatttgcatctatat 6683 Query: 167 cattattaactcaattagcagccctcaattttaatgtttcgatcagtttcctttcactgt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6682 cattattaactcaattagcagccctcaattttaatgtttcgatcagtttcctttcactgt 6623 Query: 227 tttgtatcaattggtctatatatacgccattatacatgtaaatgtagaattctctttaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6622 tttgtatcaattggtctatatatacgccattatacatgtaaatgtagaattctctttaaa 6563 Query: 287 gttagatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6562 gttagatccacatgtctctaatacttgtaaattagaaagatagaacagttagaagagaag 6503 Query: 347 tgtgcggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgagg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6502 tgtgcggatgacggctggaactgatgcacatgctcgaataattttaaaaatggtgcgagg 6443 Query: 407 acagaataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggaga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6442 acagaataaagataatgaagaagaataaggaggggaagaagggaaagaagtagaaggaga 6383 Query: 467 aagaacggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaactt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6382 aagaacggaaatctaacagtacgttatgttttgttttttgttcaatatagcttcaaactt 6323 Query: 527 acaacttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgtagg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6322 acaacttcaaagcctttggcttttcccatgggtattcttggttagtgaagtgaccgta-g 6264 Query: 587 aagcggttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtc 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6263 aagcggttggcaagtagattggtctagccaaatctaattccttcacaaggacaccaggtc 6204 Query: 647 tcaagtcgaagttcttcttgatgattttcaataacttcttcatctgggatggtagcggta 706 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6203 tcaagtcgaagttcttcttgatga-tttcaataacttcttcatctgggatggtagcggta 6145 Query: 707 ccataggtgtcgacatgcaaagattaaggttcagcgataccgatagcgtaagagaattgg 766 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 6144 ccataggtgtcgacatgcaaggataaaggttcagcgataccgatagcgtaagagaattgg 6085 Query: 767 acttgaactctcttacagatcccagcgtggaccaaagacttagc-acccatctagcggng 825 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | Sbjct: 6084 acttgaactctcttacagataccagcgtggaccaaagacttagcaacccatctagcggcg 6025 Query: 826 ttagcacgcgg-accgtcgacctttgaattattccttaccggagaaagc-ccccccccga 883 | |||| |||| || ||||||| ||| | || ||||||||||||||||| || || |||| Sbjct: 6024 taagca-gcggaacggtcgacc-ttggagtaatccttaccggagaaagcaccaccaccga 5967 Query: 884 ccggcgaagccccaccgttagcatcggcgattatcttt 921 | | ||||| ||||||| ||||||| |||| |||||| Sbjct: 5966 cagcagaagcaccaccgtaagcatcgacgataatcttt 5929 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7396 Number of Sequences: 1807 Number of extensions: 7396 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)