BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZF08RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1730 1469 0.0 >3x_Contig1730 Length = 17223 Score = 1469 bits (741), Expect = 0.0 Identities = 808/825 (97%), Gaps = 4/825 (0%) Strand = Plus / Minus Query: 45 gcttaagataaggtttggtacaatggcaataacaaaacacacacctaatcggaaaagaga 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8874 gcttaagataaggtttggtacaatggcaataacaaaacacacacctaatcggaaaagaga 8815 Query: 105 gacttgtcttaatctgatcaatgcagaatcactaacaaaatagcaaatacacttaaaaaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8814 gacttgtcttaatctgatcaatgcagaatcactaacaaaatagcaaatacacttaaaaaa 8755 Query: 165 tacaaataagctaacgtagaacgaaagcttcttttcctgtaaattacaaatttatttctt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8754 tacaaataagctaacgtagaacgaaagcttcttttcctgtaaattacaaatttatttctt 8695 Query: 225 aaaggtgtggaaatattgaaagttcaataaattttcaattttttttccttcctttaccta 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8694 aaaggtgtggaaatattgaaagttcaataaattttcaattttttttccttcctttaccta 8635 Query: 285 tattttttcaaaactttctctgtttttgatcggatcctccctcctatgtgttcttctttg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8634 tattttttcaaaactttctctgtttttgatcggatcctccctcctatgtgttcttctttg 8575 Query: 345 tctctgtttcgtttctgctcttgtgttcttgttccggccaaagaggtccaaaaaaaaaaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8574 tctctgtttcgtttctgctcttgtgttcttgttccggccaaagaggtccaaaaaaaaaaa 8515 Query: 405 aaaaaaacacgatctaagttcctcagtagtcgtaggaaacgatgacgtgttttcattggt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8514 aaaaaaacacgatctaagttcctcagtagtcgtaggaaacgatgacgtgttttcattggt 8455 Query: 465 tgcgagtcacgtggaaattaaacactatgctttcacttttaatagatatatttgacctta 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8454 tgcgagtcacgtggaaattaaacactatgctttcacttttaatagatatatttgacctta 8395 Query: 525 atagacgctatgaggcttcttaaaagtaatttgtattggatatttggtgcatcgagagtt 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8394 atagacgctatgaggcttcttaaaagtaatttgtattggatatttggtgcatcgagagtt 8335 Query: 585 tgagactaagaatcgctatcttacaatcacgtgatttaataatagcacgtgatctatata 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8334 tgagactaagaatcgctatcttacaatcacgtgatttaataatagcacgtgatctatata 8275 Query: 645 ttttcctcttctttttgaagatccgaaaaggtaantctggagtttcttttttgtagttga 704 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 8274 ttttcctcttctttttgaagatccgaaaaggtaa-tctggagtttcttttttgtagttga 8216 Query: 705 aaaattcaagaaagttgatgttttgagagatgagacgagatgagatgagatgagagactc 764 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 8215 aaaattcaagaaagttgatg-tttgagagatgagacgagatgagatgagatgagagactc 8157 Query: 765 ttatttgaataaat-agctgtactcaatagtgaatttgaagtgaggacggggaaattaca 823 |||| || |||||| |||||||||||||||||| || |||||||||||| | || |||| Sbjct: 8156 ttatatggataaatcagctgtactcaatagtgagttgtaagtgaggacggtg-aagtaca 8098 Query: 824 cgtaaaaatcccgcaaattaaatggggtaaaagtctttggccgaa 868 ||||||| | |||| |||||||||| ||||||||||||||||| Sbjct: 8097 cgtaaaatacacgcagattaaatgggtaaaaagtctttggccgaa 8053 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 23,282 Number of Sequences: 1807 Number of extensions: 23282 Number of successful extensions: 3562 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)