BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZF10RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig605 997 0.0 >3x_Contig605 Length = 2275 Score = 997 bits (503), Expect = 0.0 Identities = 571/590 (96%), Gaps = 3/590 (0%) Strand = Plus / Minus Query: 47 ttgataggtgtcgacgttggtggtacgaatagcgatttagtcgttcttgaccccactaga 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1037 ttgataggtgtcgacgttggtggtacgaatagcgatttagtcgttcttgaccccactaga 978 Query: 107 ctggggcaccccgatagaggggtattggcgtggcacaaatcagtgaccactcctgacgta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 ctggggcaccccgatagaggggtattggcgtggcacaaatcagtgaccactcctgacgta 918 Query: 167 tctgttgggatccaagctgctattaagactatcctagaaaatccaaacaaccatattgaa 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 tctgttgggatccaagctgctattaagactatcctagaaaatccaaacaaccatattgaa 858 Query: 227 aagtcagaaatcgtttctgtcacaatcggtactactcatttcataaatgccgtcattgaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 aagtcagaaatcgtttctgtcacaatcggtactactcatttcataaatgccgtcattgaa 798 Query: 287 cgtgattcgagcagattggaaaaggttgcagtcatcagattgtccggtccctatggtaga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 cgtgattcgagcagattggaaaaggttgcagtcatcagattgtccggtccctatggtaga 738 Query: 347 catatgcccccatttggcgattttcctgaggatttggccgagatcatcaatggatattac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 catatgcccccatttggcgattttcctgaggatttggccgagatcatcaatggatattac 678 Query: 407 tgtactcttgacggtggttgtagagtggatggntaggatatcaagcctttggatgaagac 466 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 677 tgtactcttgacggtggttgtagagtggatggtaaggatatcaagcctttggatgaagac 618 Query: 467 ggtttgagaaaaagatgtgctaatatcaaaacattgggtataactgcagtggcggttgtt 526 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 ggtttgagaaaagaatgtgctaatatcaaaacattgggtataactgcagtggcggttgtt 558 Query: 527 gccacatttggcaata-taacatggatcatgaattgggagcttcaaagattataaa-gaa 584 |||||||||| ||||| ||||| |||||||||||| ||||| ||||||||||||| ||| Sbjct: 557 gccacatttgccaatattaacaatgatcatgaattgagagctacaaagattataaaggaa 498 Query: 585 gccgtcccg-atgttcatgtagttatttctcatacaatttctgggttggg 633 || | ||| |||| |||||||||| ||||||||||||||||| ||||| Sbjct: 497 gcgttaccgaatgtcgatgtagttatgtctcatacaatttctggcttggg 448 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,574 Number of Sequences: 1807 Number of extensions: 11574 Number of successful extensions: 100 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)