BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZG01RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig850 797 0.0 >3x_Contig850 Length = 2234 Score = 797 bits (402), Expect = 0.0 Identities = 430/436 (98%), Gaps = 5/436 (1%) Strand = Plus / Minus Query: 48 ccttaattctgttctgacgagtttctgccaaatatttttggagaagacaaaagaaatcac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ccttaattctgttctgacgagtttctgccaaatatttttggagaagacaaaagaaatcac 573 Query: 108 gtgactaaatttaccgtctaatgttcagtcctccaccgctagcccagtaagccagagaat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gtgactaaatttaccgtctaatgttcagtcctccaccgctagcccagtaagccagagaat 513 Query: 168 ggaatgtgatgaattggtaccccaaatgtaacttcggtttaacggtctttgcaagaagca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 ggaatgtgatgaattggtaccccaaatgtaacttcggtttaacggtctttgcaagaagca 453 Query: 228 cataatttattatagttacccgaatgctcttcactcttcaattgttccccattgagggag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 cataatttattatagttacccgaatgctcttcactcttcaattgttccccattgagggag 393 Query: 288 aaaagttgaattagagactgggaaaaaaaaactggccatcaaaaacagtattttgacttt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 aaaagttgaattagagactgggaaaaaaaaactggccatcaaaaacagtattttgacttt 333 Query: 348 caatgagatttattatcttatgatggattcagcttttgattcatttctggtactgttttt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 caatgagatttattatcttatgatggattcagcttttgattcatttctggtactgttttt 273 Query: 408 ctgtcatttgaattgatctgatcaataat---ttcggtttggaaatagtatt-cagacta 463 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| Sbjct: 272 ctgtcatttgaattgatctgatcaataatatctacggtttggaaatagtattacagacta 213 Query: 464 atactg-tgtactttt 478 |||||| ||||||||| Sbjct: 212 atactgctgtactttt 197 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9480 Number of Sequences: 1807 Number of extensions: 9480 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)