BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZG05RM1.SCF screened BAC_end (1015 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig690 1124 0.0 >3x_Contig690 Length = 2822 Score = 1124 bits (567), Expect = 0.0 Identities = 630/647 (97%), Gaps = 3/647 (0%) Strand = Plus / Plus Query: 63 cttctcatacataggatatagcttatgggatgcaagccgactaaagagctcaaacaatat 122 |||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| Sbjct: 1186 cttctcatacataggatatagcttattgtatgcaagccgactatcgagctcaaacaatat 1245 Query: 123 cctgctaaccatcttcttttgtgggaagatctcatgcaatggtggccgtttgttggctaa 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1246 cctgctaaccatcttcttttgtgggaagatctcatgcaatggtggccgtttgttggctaa 1305 Query: 183 actggaaatcagtctcctgcttgataccaagatacagcttctaaaaccaagcttttttta 242 |||||||||||||||||||||||||||||||||||||||||||||||||||| | | | Sbjct: 1306 actggaaatcagtctcctgcttgataccaagatacagcttctaaaaccaagcatctcgaa 1365 Query: 243 caaaaacagttttagctctcgggtatatcagaagattcgaataaagcctggaagatctca 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1366 caaaaacagttttagctctcgggtatatcagaagattcgaataaagcctggaagatctca 1425 Query: 303 caaaagcctaacgttctgcttaatcctgtaggtctgcctttgatccatttgtgcgtaaga 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1426 caaaagcctaacgttctgcttaatcctgtaggtctgcctttgatccatttgtgcgtaaga 1485 Query: 363 acttgatgatgtatttggttttgatcctttcctggttaaaattcgagtttctataaaatg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1486 acttgatgatgtatttggttttgatcctttcctggttaaaattcgagtttctataaaatg 1545 Query: 423 attctttaccaaccgttacacataatcggataaggtccgattatttaagttaaaggcatg 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1546 attctttaccaaccgttacacataatcggataaggtccgattatttaagttaaaggcatg 1605 Query: 483 aaagtaggtgtcaatacacaatcaatatctatcaatggtgctaaaattccaagctaattg 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1606 aaagtaggtgtcaatacacaatcaatatctatcaatggtgctaaaattccaagctaattg 1665 Query: 543 tcgctctttgattcgaccattgttttcacgtttcttattcggcttcctgttgattattcg 602 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 1666 tcgctctttgattcgaccattgttttcacgttt-ttattcggc-tcctgttgattattcg 1723 Query: 603 catgctgttatcggcgcaggtgtagtcggactgtctattgccaacgaacttaccaaagtc 662 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1724 catgctgttatcggtgcaggtgtagtcggactggctattgccaacgaacttaccaaagtc 1783 Query: 663 ccaggcaattaattgattgttttggtagaagattgcaaagattggcc 709 ||||||||| || |||||||||||| |||||| |||||||||||||| Sbjct: 1784 ccaggcaataaagtgattgttttgg-agaagaatgcaaagattggcc 1829 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8854 Number of Sequences: 1807 Number of extensions: 8854 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 1015 length of database: 10,358,551 effective HSP length: 16 effective length of query: 999 effective length of database: 10,329,639 effective search space: 10319309361 effective search space used: 10319309361 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)