BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZG06FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1652 1392 0.0 >3x_Contig1652 Length = 14842 Score = 1392 bits (702), Expect = 0.0 Identities = 797/817 (97%), Gaps = 10/817 (1%) Strand = Plus / Plus Query: 90 aatcgtaatcagggtagtatgaaaacaacggagaactgcgagacaaagatctctgcgact 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4833 aatcgtaatcagggtagtatgaaaacaacggagaactgcgagacaaagatctctgcgact 4892 Query: 150 gtgttcaactcagttcagacttataaactagctcatcttgattgaatttaacttttacac 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4893 gtgttcaactcagttcagacttataaactagctcatcttgattgaatttaacttttacac 4952 Query: 210 ttttcagactttaggaaaaaaagaaagttgaagtttaatgagagtcgtattttgtgatta 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4953 ttttcagactttaggaaaaaaagaaagttgaagtttaatgagagtcgtattttgtgatta 5012 Query: 270 atgatgaagttggctgacggttttatagtacaattgataatcggttcgttatgaaactat 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5013 atgatgaagttggctgacggttttatagtacaattgataatcggttcgttatgaaactat 5072 Query: 330 atacatatatatatatatattctatacaggcggacacaattcatgcggaattttcgtctt 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5073 atacatatatatatatatattctatacaggcggacacaattcatgcggaattttcgtctt 5132 Query: 390 gtatagtttttggctgtatttctgcatttgcattgctgtcttcggtctcttcttttaccg 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5133 gtatagtttttggctgtatttctgcatttgcattgctgtcttcggtctcttcttttaccg 5192 Query: 450 gctcgctctctgcgatcactgcttgtcttaggatttctgcgaatgtgtcactgacagtaa 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5193 gctcgctctctgcgatcactgcttgtcttaggatttctgcgaatgtgtcactgacagtaa 5252 Query: 510 ccggttcgggattctttgaagtctttggattaccgttgcacttggctaattcactaccga 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5253 ccggttcgggattctttgaagtctttggattaccgttgcacttggctaattcactaccga 5312 Query: 570 aagcttcaatggcttttctattcgtccagttgttgattgaaatgcgttctgtttctcttt 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5313 aagcttcaatggcttttctattcgtccagttgttgattgaaatgcgttctgtttctcttt 5372 Query: 630 gtaggtttaaaagcttatcaaagctttttttgaggacggtcatttttctgtcacgagatg 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5373 gtaggtttaaaagcttatcaaagctttttttgaggacggtcatttttctgtcacgagatg 5432 Query: 690 cacgtaatgatttcctttgcaaccttgacatcttggcaccattttcagtctcttttacat 749 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5433 cacgtaatgatttcctttgcaaccttgacatcttggcaccattttcagtctctttaccat 5492 Query: 750 ccaacgcttttttctttgccaataactcgttcacgctgtggcttcgnagttgctccagtt 809 ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct: 5493 ccaacgcttttttctttgccaataactcg-tcacgctgt-gcttcg-agttgctccagtt 5549 Query: 810 ttcaaaaaatctttacgagttcttagatggagtcttcagaagcccattttatcttgtggc 869 | || |||| ||||||| |||||||| ||||| ||| || ||||| ||||||||| Sbjct: 5550 tcagaagaatc-ttacgag-tcttagat-gagtcatcaagag-ccattatatcttgtg-- 5603 Query: 870 caatcttctctaactcgcctttctatatcagactcat 906 ||||||||||||||||||| ||||||||||||||||| Sbjct: 5604 caatcttctctaactcgcc-ttctatatcagactcat 5639 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,041 Number of Sequences: 1807 Number of extensions: 11041 Number of successful extensions: 1531 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)