BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZH02FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1605 1520 0.0 >3x_Contig1605 Length = 12373 Score = 1520 bits (767), Expect = 0.0 Identities = 805/814 (98%), Gaps = 3/814 (0%) Strand = Plus / Plus Query: 86 cgattactaggatcatatcttagaaagtctccattaacatcgactgtttcggagcctgga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9342 cgattactaggatcatatcttagaaagtctccattaacatcgactgtttcggagcctgga 9401 Query: 146 atcaagatatcaccaaaacagtttaccttctcagttagagtgcgagataaagaccgtcct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9402 atcaagatatcaccaaaacagtttaccttctcagttagagtgcgagataaagaccgtcct 9461 Query: 206 tccaaaataagctcatctaaaataaatgaacctgcctctaagttggaaaacacttcaacc 265 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9462 tccaaaataagcacaactaaaataaatgaacctgcctctaagttggaaaacacttcaacc 9521 Query: 266 gtggtgcataatgaatatttgaattcattgcagctaccgtatcttgcacgaacatcgttg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9522 gtggtgcataatgaatatttgaattcattgcagctaccgtatcttgcacgaacatcgttg 9581 Query: 326 cgagttagcaaatatgactataaacgagccgctcaattttccaacacactaaaaagaact 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9582 cgagttagcaaatatgactataaacgagccgctcaattttccaacacactaaaaagaact 9641 Query: 386 ttgaaaactcaagacgcacacgaaagaatattctccatatccagtgaagatgttgctaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9642 ttgaaaactcaagacgcacacgaaagaatattctccatatccagtgaagatgttgctaaa 9701 Query: 446 cttatttctagtctttttcaagtctctgaggataatgtttctcttgtcgctaaaaagcgt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9702 cttatttctagtctttttcaagtctctgaggataatgtttctcttgtcgctaaaaagcgt 9761 Query: 506 ttctttgaaagggaatgtttcactgaaattcccaaaataacagaagaagtactaagcgat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9762 ttctttgaaagggaatgtttcactgaaattcccaaaataacagaagaagtactaagcgat 9821 Query: 566 attcaagagttcgaagactatattggacttttgacgcacaccaaattccatcacaaaggg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9822 attcaagagttcgaagactatattggacttttgacgcacaccaaattccatcacaaaggg 9881 Query: 626 tcatctttacaagacggaataataccgaaacttcttaagaatttgctacatccttctaat 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9882 tcatctttacaagacggaataataccgaaacttcttaagaatttgctacatccttctaat 9941 Query: 686 ttacgaattgcgccattgaaaacggcttcagtgttcaacgatgtaatatactactacgga 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9942 ttacgaattgcgccattgaaaacggcttcagtgttcaacgatgtaatatactactacgga 10001 Query: 746 aacaagaacaattttgccacctgcagagagctttatgcacaaatgaaatccgaaggtatc 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10002 aacaagaacaattttgccacctgcagagagctttatgcacaaatgaaatccgaaggtatc 10061 Query: 806 gcaccaaacgtccaaacttataattttaatgtttagggaactttctcagnaactccaggt 865 ||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||| Sbjct: 10062 gcaccaaacgtccaaacttataa-tttaatg-ttaaggaaccttctcaggaactccaggt 10119 Query: 866 taatttaaacaacaacttccatatcgcgaagcaa 899 ||| ||||||||||||| |||||||||||||||| Sbjct: 10120 taa-ttaaacaacaactcccatatcgcgaagcaa 10152 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6439 Number of Sequences: 1807 Number of extensions: 6439 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)