BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC24ZH04RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1650 1384 0.0 >3x_Contig1650 Length = 11257 Score = 1384 bits (698), Expect = 0.0 Identities = 760/778 (97%), Gaps = 2/778 (0%) Strand = Plus / Plus Query: 45 gcttattaattatcacttcaacatttcatgctaacccataaagactctaacagagaaaat 104 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9617 gcttattaattatcacttcaacatc-catgctaacccataaagactctaacagagaaaat 9675 Query: 105 cttagacagttttctaatttgtagtcacttatttgaaccaagaaaaacctacagcttgaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9676 cttagacagttttctaatttgtagtcacttatttgaaccaagaaaaacctacagcttgaa 9735 Query: 165 aactcatccttcacatgttttattcaattgaaactgatttctgattaaatcaaatgtttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9736 aactcatccttcacatgttttattcaattgaaactgatttctgattaaatcaaaggtttc 9795 Query: 225 caggattggagcagagctcccttattcagcaattcaagatcctcgaaagatttttttttt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9796 caggattggagcagagctcccttattcagcaattcaagatcctcgaaagatttttttttt 9855 Query: 285 gaaagtagaaagtcccccagttcgaaacccacgtatctcttaacaataattttatctgta 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9856 gaaagtagaaagtcccccagttcgaaacccacgtatctcttaacaataattttatctgta 9915 Query: 345 aaatttcttttcgattgacgagagatatggaaaactttaaagcgatgagatgagatgaga 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9916 aaatttcttttcgattgacgagagatatggaaaactttaaagcgatgagatgagatgaga 9975 Query: 405 tgagatgagagtaggatgagattacatgaaaggagattattttaggtttgggtttggcta 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9976 tgagatgagagtaggatgagattacatgaaaggagattattttaggtttgggtttggcta 10035 Query: 465 gcgcatgtgttacataactttaaacagagtctggattcagataagttgaaaacaattaaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10036 gcgcatgtgttacataactttaaacagagtctggattcagataagttgaaaacaattaaa 10095 Query: 525 atttaaggcatttcctgtttcattttgtaattgatatcacaagttccacaattaacagta 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10096 atttaaggcatttcctgtttcattttgtaattgatatcacaagttccacaattaacagta 10155 Query: 585 ttcttataaactgaaaggatcatacacatcatggttctgtctagtaattggttaagctta 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10156 ttcttataaactgaaaggatcatacacatcatggttctgtctagtaattggttaagctta 10215 Query: 645 cagaagagtactgattctgatagcgtgaataagaattagggtggaaagaagacgaatagt 704 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 10216 cagaagagtactgattctgatagcgtgaataagaataagggtggaaagaagacgaaaagt 10275 Query: 705 atttctaagaagaggacagtttccgtttaaaaagacacacagtttgttcaacaagaagaa 764 | ||||||||||||||||||||||||| ||||||||| ||||| || || |||||||||| Sbjct: 10276 aattctaagaagaggacagtttccgttaaaaaagacaaacagtatg-tcgacaagaagaa 10334 Query: 765 gaataatggtactgggtctaaagacatggatttggttgccaatataaatagggaaatc 822 ||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 10335 gaagaatggtactgggtctaagatcatggatatggttgccaatatgaatagggaaatc 10392 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,284 Number of Sequences: 1807 Number of extensions: 11284 Number of successful extensions: 687 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)