BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZA06FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1697                                                        1574   0.0  

>3x_Contig1697 
          Length = 16220

 Score = 1574 bits (794), Expect = 0.0
 Identities = 818/825 (99%), Gaps = 1/825 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   aaacagcatagaaactttatcgaaaat-aattgccccgtatcaggtttacaagactcaat 146
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 8607 aaacagcatagaaactttatcgaaaatcaattgccccgtatcaggtttacaagactcaat 8548

                                                                        
Query: 147  tcccttaacttttacatcagtcccgtcttaccagcgatcttcgatgacgttaccatttca 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8547 tcccttaacttttacatcagtcccgtcttaccagcgatcttcgatgacgttaccatttca 8488

                                                                        
Query: 207  aacaacttaacttatctaacgatagctggcaacaagaaaatcaatgacgaagagttaatc 266
            |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8487 aacaacttaacgaaactaacgatagctggcaacaagaaaatcaatgacgaagagttaatc 8428

                                                                        
Query: 267  tcactgattttggggctgccgaatttgatagatttagacctacgtgcatgttctcagatc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8427 tcactgattttggggctgccgaatttgatagatttagacctacgtgcatgttctcagatc 8368

                                                                        
Query: 327  agtgacatttccatcgtttctatcgtaacgcactgtcccaaactacaaagtataaacttg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8367 agtgacatttccatcgtttctatcgtaacgcactgtcccaaactacaaagtataaacttg 8308

                                                                        
Query: 387  gggcgtcatgaaaactcgcatttgattactgatctttcaatcatggcactatctgagtta 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8307 gggcgtcatgaaaactcgcatttgattactgatctttcaatcatggcactatctgagtta 8248

                                                                        
Query: 447  gaacatcttactacggtcggtttctcaggatgcgacaagatctctgacgtatcaatatgg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8247 gaacatcttactacggtcggtttctcaggatgcgacaagatctctgacgtatcaatatgg 8188

                                                                        
Query: 507  caactgtacagcaaacattcaacaacgctggttcgattgtcaataaatggctgcacacaa 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8187 caactgtacagcaaacattcaacaacgctggttcgattgtcaataaatggctgcacacaa 8128

                                                                        
Query: 567  atatcagatagtagcattagcgatatcgttgccaagcatggatttccaaatctgaaagtc 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8127 atatcagatagtagcattagcgatatcgttgccaagcatggatttccaaatctgaaagtc 8068

                                                                        
Query: 627  ttagatatccggaactgtcaactggttcgtttcaaaaacttaatccaataccgtgactgg 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8067 ttagatatccggaactgtcaactggttcgtttcaaaaacttaatccaataccgtgactgg 8008

                                                                        
Query: 687  agacacaaatatctgatgaaaccgatacatatccatatcagtgattcgatgaagaaagaa 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8007 agacacaaatatctgatgaaaccgatacatatccatatcagtgattcgatgaagaaagaa 7948

                                                                        
Query: 747  ttcgaattgcaagaacagcagctatacaaggaattcagaactcggatcgtcaacgatcta 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7947 ttcgaattgcaagaacagcagctatacaaggaattcagaactcggatcgtcaacgatcta 7888

                                                                        
Query: 807  aatagatgggtcaacgaagcgacctgagataaaaaaataatctganagactctcatacgt 866
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7887 aatagatgggtcaacgaagcgacctgagataaaaaaataatctgagagactctcatacgt 7828

                                                         
Query: 867  tataccatcagcaggtatattaccactgcttcaatcgtatcatga 911
            |||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 7827 tataccatcagcaggtatataaccactgctccaatcgtatcatga 7783


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5944
Number of Sequences: 1807
Number of extensions: 5944
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)