BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZA06FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1697 1574 0.0 >3x_Contig1697 Length = 16220 Score = 1574 bits (794), Expect = 0.0 Identities = 818/825 (99%), Gaps = 1/825 (0%) Strand = Plus / Minus Query: 88 aaacagcatagaaactttatcgaaaat-aattgccccgtatcaggtttacaagactcaat 146 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8607 aaacagcatagaaactttatcgaaaatcaattgccccgtatcaggtttacaagactcaat 8548 Query: 147 tcccttaacttttacatcagtcccgtcttaccagcgatcttcgatgacgttaccatttca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8547 tcccttaacttttacatcagtcccgtcttaccagcgatcttcgatgacgttaccatttca 8488 Query: 207 aacaacttaacttatctaacgatagctggcaacaagaaaatcaatgacgaagagttaatc 266 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8487 aacaacttaacgaaactaacgatagctggcaacaagaaaatcaatgacgaagagttaatc 8428 Query: 267 tcactgattttggggctgccgaatttgatagatttagacctacgtgcatgttctcagatc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8427 tcactgattttggggctgccgaatttgatagatttagacctacgtgcatgttctcagatc 8368 Query: 327 agtgacatttccatcgtttctatcgtaacgcactgtcccaaactacaaagtataaacttg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8367 agtgacatttccatcgtttctatcgtaacgcactgtcccaaactacaaagtataaacttg 8308 Query: 387 gggcgtcatgaaaactcgcatttgattactgatctttcaatcatggcactatctgagtta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8307 gggcgtcatgaaaactcgcatttgattactgatctttcaatcatggcactatctgagtta 8248 Query: 447 gaacatcttactacggtcggtttctcaggatgcgacaagatctctgacgtatcaatatgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8247 gaacatcttactacggtcggtttctcaggatgcgacaagatctctgacgtatcaatatgg 8188 Query: 507 caactgtacagcaaacattcaacaacgctggttcgattgtcaataaatggctgcacacaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8187 caactgtacagcaaacattcaacaacgctggttcgattgtcaataaatggctgcacacaa 8128 Query: 567 atatcagatagtagcattagcgatatcgttgccaagcatggatttccaaatctgaaagtc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8127 atatcagatagtagcattagcgatatcgttgccaagcatggatttccaaatctgaaagtc 8068 Query: 627 ttagatatccggaactgtcaactggttcgtttcaaaaacttaatccaataccgtgactgg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8067 ttagatatccggaactgtcaactggttcgtttcaaaaacttaatccaataccgtgactgg 8008 Query: 687 agacacaaatatctgatgaaaccgatacatatccatatcagtgattcgatgaagaaagaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8007 agacacaaatatctgatgaaaccgatacatatccatatcagtgattcgatgaagaaagaa 7948 Query: 747 ttcgaattgcaagaacagcagctatacaaggaattcagaactcggatcgtcaacgatcta 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7947 ttcgaattgcaagaacagcagctatacaaggaattcagaactcggatcgtcaacgatcta 7888 Query: 807 aatagatgggtcaacgaagcgacctgagataaaaaaataatctganagactctcatacgt 866 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7887 aatagatgggtcaacgaagcgacctgagataaaaaaataatctgagagactctcatacgt 7828 Query: 867 tataccatcagcaggtatattaccactgcttcaatcgtatcatga 911 |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 7827 tataccatcagcaggtatataaccactgctccaatcgtatcatga 7783 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5944 Number of Sequences: 1807 Number of extensions: 5944 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)