BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZB01FM1.SCF screened BAC_end
         (918 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1700                                                        1540   0.0  

>3x_Contig1700 
          Length = 16332

 Score = 1540 bits (777), Expect = 0.0
 Identities = 820/831 (98%), Gaps = 3/831 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    ttctctctgtgccgttccttgggcaggaaaaggaaaaaaaaattactcactgggagagtg 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10344 ttctctctgtgccgttccttgggcaggaaaaggaaaaaaaaattactcactgggagagtg 10285

                                                                         
Query: 147   ctagacggaccgaggttgaggttgctagacagatgtctgtctgacaagctgtctggcccg 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10284 ctagacggaccgaggttgaggttgctagacagatgtctgtctgacaagctgtctggcccg 10225

                                                                         
Query: 207   tctgttccatccattctgagttccttaagacagggccttcggccctgtctttagacggtt 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10224 tctgttccatccattctgagttccttaagacagggccttcggccctgtctttagacggtt 10165

                                                                         
Query: 267   cttagccagggggagtctggcagcctcatgtgataattacacaaatctatgtacaaatgg 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10164 cttagccagggggagtctggcagcctcatgtgataattacacaaatctatgtacaaatgg 10105

                                                                         
Query: 327   tttcctaaacgactggaagaaggatcagaaagcattgcatgttgtactcttctagaaacc 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10104 tttcctaaacgactggaagaaggatcagaaagcattgcatgttgtactcttctagaaacc 10045

                                                                         
Query: 387   cattcccgtcttcactgtagtgttttgaacgaatcgtaccaaacaggaacactatccttt 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10044 cattcccgtcttcactgtagtgttttgaacgaatcgtaccaaacaggaacactatccttt 9985

                                                                         
Query: 447   taaccagtatttctccctccctgggcttaattctcggcagtagctactgaactaggttca 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9984  taaccagtatttctccctccctgggcttaattctcggcagtagctactgaactaggttca 9925

                                                                         
Query: 507   cctgatttagttctgccatataagatgttaatcacgtgtgccatggtaagaggtggagag 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9924  cctgatttagttctgccatataagatgttaatcacgtgtgccatggtaagaggtggagag 9865

                                                                         
Query: 567   gactcgaccaggataattacacgacgtagctctgtggaaggcatctaacatgtattaaag 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9864  gactcgaccaggataattacacgacgtagctctgtggaaggcatctaacatgtattaaag 9805

                                                                         
Query: 627   agaagcacttatcccatacttatatatctatgtactcatcatatatcatctcatatatca 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9804  agaagcacttatcccatacttatatatctatgtactcatcatatatcatctcatatatca 9745

                                                                         
Query: 687   tcctcgtcactcgatgataaaccttgatgtgtcgaccccaagaattgagcanacgcctgt 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9744  tcctcgtcactcgatgataaaccttgatgtgtcgaccccaagaattgagcaaacgcctgt 9685

                                                                         
Query: 747   gatagttgcggcaacgcagaagtgtctggagcctgttttgatatgaaattagtaatcctc 806
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 9684  gatagttgcggcaacgcagaggtgtctggagcctgttttgatatgaaattagtaatcctc 9625

                                                                         
Query: 807   gttgcaaatccgagccccgccatagtcatcgncatcatcatcggcctgtttgttttcggc 866
             |||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 9624  gttgcaaatccgag-cccgtcatagtcatcgtcatcatcatcgtcctgtttgttttcggc 9566

                                                                
Query: 867   tgacccttcaataccggggattacctgggcctcgtttccaccattcctcgc 917
             ||||||| || || ||||||||||||  |||||||||||||||||||||||
Sbjct: 9565  tgaccctccagta-cggggattacct-cgcctcgtttccaccattcctcgc 9517


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5106
Number of Sequences: 1807
Number of extensions: 5106
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)