BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZB06FM1.SCF screened BAC_end
         (921 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1768                                                        1578   0.0  

>3x_Contig1768 
          Length = 25668

 Score = 1578 bits (796), Expect = 0.0
 Identities = 834/842 (99%), Gaps = 4/842 (0%)
 Strand = Plus / Plus

                                                                        
Query: 83   taaggttagcgagtctttgcaccttccgtgtgtttttccgtatgtgcctgaatctatatg 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 taaggttagcgagtctttgcaccttccgtgtgtttttccgtatgtgcctgaatctatatg 3905

                                                                        
Query: 143  caggaaactccacgaatttaatgtactagtaacgactaataatgacagacattcttatat 202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3906 caggaaactccacgaatttaatgtactagtaacgactaataatgacagacattcttatat 3965

                                                                        
Query: 203  acatacatacgacgcatatagaggaacgttcttggaagaatattatacaatcactgtata 262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 acatacatacgacgcatatagaggaacgttcttggaagaatattatacaatcactgtata 4025

                                                                        
Query: 263  gtgtgataaaccaacacataggaaaaaataagactgaccattaaaagtggagcagttttg 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4026 gtgtgataaaccaacacataggaaaaaataagactgaccattaaaagtggagcagttttg 4085

                                                                        
Query: 323  gggacggaaatatcctacgatagcatacttatctccagcttcgtctgtctgactaattat 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4086 gggacggaaatatcctacgatagcatacttatctccagcttcgtctgtctgactaattat 4145

                                                                        
Query: 383  gccttatctacgacttttttgcctttatattcctcatcaacatgaaaaactgcaacattt 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4146 gccttatctacgacttttttgcctttatattcctcatcaacatgaaaaactgcaacattt 4205

                                                                        
Query: 443  aaaaggatgcaatcctgggtaataaatgaatgctgcaaaaataatgtgaagttgcaatcc 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4206 aaaaggatgcaatcctgggtaataaatgaatgctgcaaaaataatgtgaagttgcaatcc 4265

                                                                        
Query: 503  cgaagctcttgcatgtagtaacgttgtgagaacagtggatctgtatgttgtgagcagtgg 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4266 cgaagctcttgcatgtagtaacgttgtgagaacagtggatctgtatgttgtgagcagtgg 4325

                                                                        
Query: 563  tagtgatcttcggtttaacaagcaattgagtacctaattatacatggagagtcagactgg 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4326 tagtgatcttcggtttaacaagcaattgagtacctaattatacatggagagtcagactgg 4385

                                                                        
Query: 623  tggaagtaggggtgggagcataacggaatgggatcgtaaaccctggttgaagcaagtgac 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4386 tggaagtaggggtgggagcataacggaatgggatcgtaaaccctggttgaagcaagtgac 4445

                                                                        
Query: 683  actaagatccacaataatcgggttgataataggttctcttgtactagtgtctaactttca 742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4446 actaagatccacaataatcgggttgataataggttctcttgtactagtgtctaactttca 4505

                                                                        
Query: 743  gtttggattacagacagggtgggtttctatgatgtcgttgcccagtgctcttctagcttg 802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4506 gtttggattacagacagggtgggtttctatgatgtcgttgcccagtgctcttctagcttg 4565

                                                                        
Query: 803  tgctgttttcaagc-agtgtggcccttggttttnncc-atgattcgcagttta-cgatgt 859
            |||||||||||||| ||||||||||||||||||  || ||||||||||||||| ||||||
Sbjct: 4566 tgctgttttcaagcaagtgtggcccttggttttccccaatgattcgcagtttagcgatgt 4625

                                                                        
Query: 860  tgaaaacgtttatgtgcaaagtatcgcattcgcag-tggaactggaccgttagcgtatgg 918
            ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 4626 tgagaacgtttatgtgcaaagtatcgcagtcgcagttggaactggaccgttagcgtatgg 4685

              
Query: 919  at 920
            ||
Sbjct: 4686 at 4687


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4732
Number of Sequences: 1807
Number of extensions: 4732
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)