BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZC01RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1587 1419 0.0 >3x_Contig1587 Length = 10277 Score = 1419 bits (716), Expect = 0.0 Identities = 767/780 (98%), Gaps = 3/780 (0%) Strand = Plus / Minus Query: 49 caaaggagggacttcgagagcacctttggagaatatttcgagacataattcattcaacac 108 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3338 caaaggaggg-cttcgagagcacatttggagaatatttcgagacataattcattcaacac 3280 Query: 109 tgcttttgataatccatctatatcaggctagatcgtcatccactacgatcagatctcgta 168 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 3279 tgcttttgataatccatctatatcag-ctagttcgtcatccactacgatcagatctcgta 3221 Query: 169 gacctaggcgggccacaattgtcacgggttcacaacccttaccatccccccttgcatcgt 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3220 gacctaggcgggccacaattgtcacgggttcacaacccttaccatccccccttgcatcgt 3161 Query: 229 caagctttcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagac 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3160 caagctttcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagac 3101 Query: 289 agcaatctttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatacta 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3100 agcaatctttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatacta 3041 Query: 349 ctaatacacttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaa 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3040 ctaatacacttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaa 2981 Query: 409 caactactctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacaca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2980 caactactctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacaca 2921 Query: 469 acttgttaagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcat 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2920 acttgttaagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcat 2861 Query: 529 tttcctcgatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctg 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2860 tttcctcgatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctg 2801 Query: 589 ctttttatacttcaattaacgagaatcggcctgatgtactacaggtgagaatagcagatt 648 ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 2800 cttttaatacttcaattaacgagaatcggcctgatgtaatacaggtgaaaatagcagatt 2741 Query: 649 taggaaatgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatc 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2740 taggaaatgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatc 2681 Query: 709 gttcaccagaagttattctagactgttcttggggtgccagtgcagatatatggccttttg 768 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2680 gttcaccagaagtaattctagactgttcttggggtgccagtgcagatatatggtcttttg 2621 Query: 769 cctgcttaatatttgagcttctcaca-gagattctttgtttgaaccacaaaacgggcact 827 |||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct: 2620 cctgcttaatatttgagcttctcacaggagatttcttgtttgaaccacaaaacggtcact 2561 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6365 Number of Sequences: 1807 Number of extensions: 6365 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)