BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZC01RM1.SCF screened BAC_end
         (940 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1587                                                        1419   0.0  

>3x_Contig1587 
          Length = 10277

 Score = 1419 bits (716), Expect = 0.0
 Identities = 767/780 (98%), Gaps = 3/780 (0%)
 Strand = Plus / Minus

                                                                        
Query: 49   caaaggagggacttcgagagcacctttggagaatatttcgagacataattcattcaacac 108
            |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3338 caaaggaggg-cttcgagagcacatttggagaatatttcgagacataattcattcaacac 3280

                                                                        
Query: 109  tgcttttgataatccatctatatcaggctagatcgtcatccactacgatcagatctcgta 168
            |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 3279 tgcttttgataatccatctatatcag-ctagttcgtcatccactacgatcagatctcgta 3221

                                                                        
Query: 169  gacctaggcgggccacaattgtcacgggttcacaacccttaccatccccccttgcatcgt 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3220 gacctaggcgggccacaattgtcacgggttcacaacccttaccatccccccttgcatcgt 3161

                                                                        
Query: 229  caagctttcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagac 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3160 caagctttcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagac 3101

                                                                        
Query: 289  agcaatctttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatacta 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3100 agcaatctttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatacta 3041

                                                                        
Query: 349  ctaatacacttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaa 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3040 ctaatacacttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaa 2981

                                                                        
Query: 409  caactactctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacaca 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2980 caactactctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacaca 2921

                                                                        
Query: 469  acttgttaagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcat 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2920 acttgttaagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcat 2861

                                                                        
Query: 529  tttcctcgatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctg 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2860 tttcctcgatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctg 2801

                                                                        
Query: 589  ctttttatacttcaattaacgagaatcggcctgatgtactacaggtgagaatagcagatt 648
            ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 2800 cttttaatacttcaattaacgagaatcggcctgatgtaatacaggtgaaaatagcagatt 2741

                                                                        
Query: 649  taggaaatgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatc 708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2740 taggaaatgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatc 2681

                                                                        
Query: 709  gttcaccagaagttattctagactgttcttggggtgccagtgcagatatatggccttttg 768
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2680 gttcaccagaagtaattctagactgttcttggggtgccagtgcagatatatggtcttttg 2621

                                                                        
Query: 769  cctgcttaatatttgagcttctcaca-gagattctttgtttgaaccacaaaacgggcact 827
            |||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||
Sbjct: 2620 cctgcttaatatttgagcttctcacaggagatttcttgtttgaaccacaaaacggtcact 2561


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6365
Number of Sequences: 1807
Number of extensions: 6365
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)