BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZC03RM1.SCF screened BAC_end (887 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig914 1392 0.0 >3x_Contig914 Length = 2833 Score = 1392 bits (702), Expect = 0.0 Identities = 754/769 (98%), Gaps = 2/769 (0%) Strand = Plus / Plus Query: 46 atagtttcttcgttgttgatccccataagtttagtaacacccttttcagtacgtagttct 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1580 atagtttcttcgttgttgatccccataagtttagtaacacccttttcagtacgtagttct 1639 Query: 106 tgaagtttagcgaaatcggctggtgttaagatacgactggatgctaattcacggaaagct 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640 tgaagtttagcgaaatcggctggtgttaagatacgactggatgctaattcacggaaagct 1699 Query: 166 tcttctgggtcagcggattcactttcttccttctgctcttctcccacctttggttcttct 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700 tcttctgggtcagcggattcactttcttccttctgctcttctcccacctttggttcttct 1759 Query: 226 tcatcaccggataattctaaatcactatcttcaccagcttccggttcgacttcatcgtgg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1760 tcatcaccggataattctaaatcactatcttcaccagcttccggttcgacttcatcgtgg 1819 Query: 286 gaacgtttcttacccttatgacctgttttgttcttgctttcctcatcgtcagagtccatg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1820 gaacgtttcttacccttatgacctgttttgttcttgctttcctcatcgtcagagtccatg 1879 Query: 346 tcaacttcgtactctttatcgctttctatcgtcacccactcaccttctacatccgaagca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1880 tcaacttcgtactctttatcgctttctatcgtcacccactcaccttctacatccgaagca 1939 Query: 406 tctgataattcatcccggttgttcaaatcccatgcagcctcatcatcatcatcctcctcg 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1940 tctgataattcatcccggttgttcaaatcccatgcagcctcatcatcatcatcctcctcg 1999 Query: 466 tttccgttctcacgcttccacttcgctagtaactcaataccatctataccttgtacatta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2000 tttccgttctcacgcttccacttcgctagtaactcaataccatctataccttgtacatta 2059 Query: 526 gtagtctcgacaccaaacttgacacgtttggattccctgccattgcgtttgtcgtcctgt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2060 gtagtctcgacaccaaacttgacacgtttggattccctgccattgcgtttgtcgtcctgt 2119 Query: 586 agtcccatagaagcggtcttaccacgatctttcttttttaacatcttcggnagcaacttc 645 ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 2120 agtcccatagaagcggtcttaccacgatctttcttctttaacatctccgg-agcaacttc 2178 Query: 646 tctgtataatgcaatcaaaccttaagcaccaatgccgacactcttggcccttnagccctt 705 ||||||||||||||||||||| | |||| ||||| |||||||||||||| | ||||||| Sbjct: 2179 tctgtataatgcaatcaaacccttagcagcaatggcgacactcttggccttggagccctt 2238 Query: 706 atattcggttaaatcttgtagtaaagtctcatcgattgctaatggggcacgagtcaagat 765 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2239 atattcggttaaatcttgtagtaaagtctcatcgatagctaatggggcacgagtcaagat 2298 Query: 766 tcctttgactgtattcaaacccacagtggccaacctcatttggaacacc 814 | || |||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 2299 ttctctgactgtattcaaacccacagtgg-caacctcatttgaaacacc 2346 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6433 Number of Sequences: 1807 Number of extensions: 6433 Number of successful extensions: 78 Number of sequences better than 1.0e-20: 1 length of query: 887 length of database: 10,358,551 effective HSP length: 16 effective length of query: 871 effective length of database: 10,329,639 effective search space: 8997115569 effective search space used: 8997115569 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)