BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZC05FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1524 1550 0.0 >3x_Contig1524 Length = 11623 Score = 1550 bits (782), Expect = 0.0 Identities = 829/840 (98%), Gaps = 4/840 (0%) Strand = Plus / Plus Query: 86 ttaacgctactggattctgtccaatcggtctctaataccggtcaaagtatcccattgttc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2265 ttaacgctactggattctgtccaatcggtctctaataccggtcaaagtatcccattgttc 2324 Query: 146 attccctttaaaagtacaaatgtactggtacgatccattaaacctcttgaatcggatact 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2325 attccctttaaaagtacaaatgtactggtacgatccattaaacctcttgaatcggatact 2384 Query: 206 aatagtagtaaaagcgaagatccaccgatactcattgaacctgaagatgatggtttgggg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2385 aatagtagtaaaagcgaagatccaccgatactcattgaacctgaagatgatggtttgggg 2444 Query: 266 caagtacctcgtgatgaaatagaaatggttgatcaagatcccaacgacataaaattggac 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2445 caagtacctcgtgatgaaatagaaatggttgatcaagatcccaacgacataaaattggac 2504 Query: 326 acgaaggatgataaaaagccaatattcgattaccaatacaagggtatgagacttttcgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2505 acgaaggatgataaaaagccaatattcgattaccaatacaagggtatgagacttttcgat 2564 Query: 386 aaatgtattaaaatacacgtacttgggcggccaaaacgtggtaaaaagaattgaatctac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2565 aaatgtattaaaatacacgtacttgggcggccaaaacgtggtaaaaagaattgaatctac 2624 Query: 446 tgtgctttccttcacgttgaatactactatctaactcatttcaaaaaccctttaccgtca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2625 tgtgctttccttcacgttgaatactactatctaactcatttcaaaaaccctttaccgtca 2684 Query: 506 agcatgggtaattcggagatatatgaatataagacctcaggtaattttataaatacttca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2685 agcatgggtaattcggagatatatgaatataagacctcaggtaattttataaatacttca 2744 Query: 566 agaaaacgagcattgccatccactcgtgtcgttgacaaaagagctcagtgcataaggcat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2745 agaaaacgagcattgccatccactcgtgtcgttgacaaaagagctcagtgcataaggcat 2804 Query: 626 aacatgcaaaggttccacatccatctacccaagtctcgcttgcagactgtcatgcagttg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2805 aacatgcaaaggttccacatccatctacccaagtctcgcttgcagactgtcatgcagttg 2864 Query: 686 atctgacttaattgacgnaagttctccattaacatgaaaaanaaaataattagtcacatt 745 ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 2865 atctgacttaattgacgaaggttctccattaacatgaaaaaaaaaataattagtcacatt 2924 Query: 746 tatcagatcaatagaaccgttcaaagtagttagccaaaaggtttgaataacagtgtaaag 805 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2925 tatcagatcaatagaaccgttcaaagtagttagcc-aaaggtttgaataacagtgtaaag 2983 Query: 806 acagtataactcgttataagggtgatcatagtactgctaattgtgacatgtcagttntct 865 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2984 acagtataactcgttat-agggtgatcatagtactgctaattgtgacatgtcagtt-tct 3041 Query: 866 gaatccattgcgaaaaccgctcgtgcagcccggcaatttattgaaaacctttagtgatga 925 |||||||||||||| ||||||||||||| |||||||| |||||||||| || |||||||| Sbjct: 3042 gaatccattgcgaagaccgctcgtgcag-ccggcaatatattgaaaacgttaagtgatga 3100 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5698 Number of Sequences: 1807 Number of extensions: 5698 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)