BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZD03RM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1278 1332 0.0 >3x_Contig1278 Length = 6932 Score = 1332 bits (672), Expect = 0.0 Identities = 749/772 (97%), Gaps = 3/772 (0%) Strand = Plus / Plus Query: 47 attaccaatgtgcgatgatatt-aaatgctaga-aaatt-acacagctatgagacaactt 103 |||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||| Sbjct: 4795 attaccaatgtgcgatgagattcaaatgctagacaaattcacacagctatgagacaactt 4854 Query: 104 aagttcgccaccgtatgacatgatctcgaagaccgaaaactagaaaattaattcactatg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4855 aagttcgccaccgtatgacatgatctcgaagaccgaaaactagaaaattaattcactatg 4914 Query: 164 gggaagtttggactaccttaaactttattcattaaaatcttaggaaattgttcatgacta 223 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 4915 gggaagtttggactaccttaaactttattcattaaaatcttaggaaatcgttcaggacta 4974 Query: 224 atcttctaaagtagtatggtattgttttaattatagctttttcagtatatctgaaatagt 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4975 atcttctaaagtagtatggtattgttttaattatagctttttcagtatatctgaaatagt 5034 Query: 284 aaatattaatgaagatgcatatatagacgaattgaaaaaaggtactaacgacgtggggat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5035 aaatattaatgaagatgcatatatagacgaattgaaaaaaggtactaacgacgtggggat 5094 Query: 344 atgaaagcattaggaatgaacgttaataatcgtggtattgtaaagtgatgaaggaactga 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5095 atgaaagcattaggaatgaacgttaataatcgtggtattgtaaagtgatgaaggaactga 5154 Query: 404 aacaatgaagtttgcattatttttcggtttgaagagaaatcttcaagctgcaaatgtgaa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5155 aacaatgaagtttgcattatttttcggtttgaagagaaatcttcaagctgcaaatgtgaa 5214 Query: 464 agtaaatactcaaaagatggattcttttatagtatctgttaacctattacaacaatagag 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5215 agtaaatactcaaaagatggattcttttatagtatctgttaacctattacaacaatagag 5274 Query: 524 cagcgatggcggcgataccagcaccggcaccgagagtgaccttgccagcgttgttgccgg 583 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5275 cagcgatggcggcgataccagcaccggcaccgaaggtgaccttgccagcgttgttgccgg 5334 Query: 584 attcagtcttgatccagacggattgagtaccagtggtagcttgaatttggccatcaccga 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5335 attcagtcttgatccagacggattgagtaccagtggtagcttgaatttggccatcaccga 5394 Query: 644 tttgagagactggggcaacagtttggacgacgttagaatnctttgatgtcgtttctggag 703 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 5395 tttgagagactggggcaacagtttggacgacgttagaatcctttgatgtggtttctggag 5454 Query: 704 cattggtagagttttctggggcagctgangaagtttttggggcagctgangtagtttcag 763 || |||||| | |||||||||||||||| ||||||| |||||||||||| | |||||||| Sbjct: 5455 caatggtagtggtttctggggcagctgaggaagtttctggggcagctgaggaagtttcag 5514 Query: 764 aactactttctgnagcacctgatgaagaggtagagcaaccgtcaccagagaa 815 |||||||||||| |||| |||| ||||||| |||| |||||||| ||||||| Sbjct: 5515 aactactttctggagcagctgaggaagaggaagaggaaccgtcagcagagaa 5566 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6165 Number of Sequences: 1807 Number of extensions: 6165 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)