BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZD04RM1.SCF screened BAC_end (890 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1455 0.0 >3x_Contig1739 Length = 22061 Score = 1455 bits (734), Expect = 0.0 Identities = 812/832 (97%), Gaps = 5/832 (0%) Strand = Plus / Plus Query: 48 ctaatcgctgctaattttaattctgtcaaatgtccttgacatggatttaaatccacccca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2753 ctaatcgctgctaattttaattctgtcaaatgtccttgacatggatttaaatccacccca 2812 Query: 108 tgaattctcttcggtggattaggcaaagtggcatagtgcaaaatattatcaccagcactg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 tgaattctcttcggtggattaggcaaagtggcatagtgcaaaatattatcaccagcactg 2872 Query: 168 gtaatagccaaaatggtatcttctggttgaatattaagaatgttaacatcttctctagga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2873 gtaatagccaaaatggtatcttctggttgaatattaagaatgttaacatcttctctagga 2932 Query: 228 tcttcccatgtgaatgcgtatatataactgttcttaaattggctgtactcagggttcact 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2933 tcttcccatgtgaatgcgtatatataactgttcttaaattggctgtactcagggttcact 2992 Query: 288 tcatcatagtacactctccaatgctccttttgatagaacagagaaggatatggtaaacct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2993 tcatcatagtacactctccaatgctccttttgatagaacagagaaggatatggtaaacct 3052 Query: 348 tttttagaattttctagtgctgcaatcatagctttggtcattggctgagcgttagaggaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3053 tttttagaattttctagtgctgcaatcatagctttggtcattggctgagcgttagaggaa 3112 Query: 408 gctgacgtggttataggtgcgaggtatggagatgttggtgcaagttcaacaaatctagct 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3113 gctgacgtggttataggtgcgaggtatggagatgttggtgcaagttcaacaaatctagct 3172 Query: 468 tgaagatgttgttcgtggtctttattgcaacccaaccaaatgtagtagggaattttacca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3173 tgaagatgttgttcgtggtctttattgcaacccaaccaaatgtagtagggaattttacca 3232 Query: 528 agcttgtagttataacaattcaatgatttgattgtcccgaatctatattcaagatattct 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3233 agcttgtagttataacaattcaatgatttgattgtcccgaatctatattcaagatattct 3292 Query: 588 cttctagctggatccaaaaacactttgtcgaattcaaaccac-atctncagaatgtacgg 646 |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 3293 cttctagctggatccaaaaacactttgtcgaattcaaaccacaatctccagaatgtacgg 3352 Query: 647 aatagccaaggtatatgtctgntaactagaaccaccc-aagtgttggttctttcgactag 705 ||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||| Sbjct: 3353 aatagccaaggtatatgtctgttaactag-accacccaaagtgttggttcttccgactag 3411 Query: 706 catagattcattagtgacacccaaatcaacacacgaaatgataccatccttagccatcaa 765 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| Sbjct: 3412 catagattcattagtgacaccaaaatcaacacacgaaatgataccattcttagcatccaa 3471 Query: 766 taaagatactgcgtgatcaatggccgcatagaaaccttggtatcatgcttcatgaaataa 825 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 3472 taaagatactgcgtgatcaatggccgcatagaaa-cttggtatcatgctcaatgaataag 3530 Query: 826 aaaatgtgatcccctgagctgatttcctctggtatttcaaaatcgcaagcat 877 ||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 3531 aaaatgtgatcaactgagctga-ttcctctggtatttcaaaatcgcaagcat 3581 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6412 Number of Sequences: 1807 Number of extensions: 6412 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 890 length of database: 10,358,551 effective HSP length: 16 effective length of query: 874 effective length of database: 10,329,639 effective search space: 9028104486 effective search space used: 9028104486 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)