BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZD07FM1.SCF screened BAC_end (887 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig331 1522 0.0 >3x_Contig331 Length = 1863 Score = 1522 bits (768), Expect = 0.0 Identities = 794/801 (99%), Gaps = 2/801 (0%) Strand = Plus / Minus Query: 87 tctgcaccatattgaaatcc-cactattgatagatcttgtatgttctgagagagatgtta 145 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tctgcaccatattgaaatccacactattgatagatcttgtatgttctgagagagatgtta 742 Query: 146 caactggattgtctatcgctgatgtcttattaatatcgtaaatcgcaacagacgttgaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 caactggattgtctatcgctgatgtcttattaatatcgtaaatcgcaacagacgttgaag 682 Query: 206 taccacaaattgctacatagtttttgtgattgtaaaagccagctttaacatcagatatgg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 taccacaaattgctacatagtttttgtgattgtaaaagccagctttaacatcagatatgg 622 Query: 266 ttgaaattttttttgttgttctccgtagtgtcgatgaagtgttcttcgtgatcccagtat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ttgaaattttttttgttgttctccgtagtgtcgatgaagtgttcttcgtgatcccagtat 562 Query: 326 ttgtcttcgctgtctgtaagaaatcatgtacattagttatcgtcttagaatcttcatcga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 ttgtcttcgctgtctgtaagaaatcatgtacattagttatcgtcttagaatcttcatcga 502 Query: 386 aagtgtaaatacctaaatggctttttcctgctattatcaaggatctgctctccggtgaat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 aagtgtaaatacctaaatggctttttcctgctattatcaaggatctgctctccggtgaat 442 Query: 446 tgattttatctatacttgagacttcctttccgatactcagagagtatttagcgccgtgga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 tgattttatctatacttgagacttcctttccgatactcagagagtatttagcgccgtgga 382 Query: 506 aagttctacgtttgtcaaatgaactttcagaaggtctccatcttgcatttgattcttctt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 aagttctacgtttgtcaaatgaactttcagaaggtctccatcttgcatttgattcttctt 322 Query: 566 cattaagagagctctctggtccaacatttcccgtaccatcaaaactgaagggagtgcggc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cattaagagagctctctggtccaacatttcccgtaccatcaaaactgaagggagtgcggc 262 Query: 626 tatctggtttatacttaggtgatatcctaaaaggtgaagttccaaaacctgtgttgtact 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 tatctggtttatacttaggtgatatcctaaaaggtgaagttccaaaacctgtgttgtact 202 Query: 686 gtcgatgaaaagagtatcgtgaacttgacgactgatatttcagagagggaggattttctg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 gtcgatgaaaagagtatcgtgaacttgacgactgatatttcagagagggaggattttctg 142 Query: 746 gttgctgcccttgagaagacgaagtagctctgtttgaacctcttttaaacatcgttgagc 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gttgctgcccttgagaagacgaagtagctctgtttgaacctcttttaaacatcgttgagc 82 Query: 806 aacaatactcagtgctctcgatcaccggtttattttggcttancacccattgctggattt 865 |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| Sbjct: 81 aacaatactcagtgctctcgatcaccggttta-tttggcttacaaccaattgctggattt 23 Query: 866 ttgnatcatantatgtgagtg 886 ||| |||||| |||||||||| Sbjct: 22 ttgaatcatagtatgtgagtg 2 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6103 Number of Sequences: 1807 Number of extensions: 6103 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 887 length of database: 10,358,551 effective HSP length: 16 effective length of query: 871 effective length of database: 10,329,639 effective search space: 8997115569 effective search space used: 8997115569 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)