BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZD07RM1.SCF screened BAC_end
         (894 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1467                                                        1635   0.0  

>3x_Contig1467 
          Length = 7717

 Score = 1635 bits (825), Expect = 0.0
 Identities = 829/831 (99%)
 Strand = Plus / Minus

                                                                        
Query: 48   ttatctacagtaaagcaaaatgggtatttctcgtgattctcgtcacaaaagagctgctac 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 ttatctacagtaaagcaaaatgggtatttctcgtgattctcgtcacaaaagagctgctac 3145

                                                                        
Query: 108  cggtgctaaacgtgctcaattcagaaagaagagaaagttcgaattaggccgtcaagctgc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 cggtgctaaacgtgctcaattcagaaagaagagaaagttcgaattaggccgtcaagctgc 3085

                                                                        
Query: 168  caacaccaagatcggtactaagagaattcatcctgttagaaccagaggtggtaaccagaa 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 caacaccaagatcggtactaagagaattcatcctgttagaaccagaggtggtaaccagaa 3025

                                                                        
Query: 228  gttcagagctttgagaattgaaactggtaacttctcctgggcttccgaaggtgtcgctag 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 gttcagagctttgagaattgaaactggtaacttctcctgggcttccgaaggtgtcgctag 2965

                                                                        
Query: 288  aaagaccagaatcactggtgtcgtctaccatccatccaacaatgaattggttagaactaa 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 aaagaccagaatcactggtgtcgtctaccatccatccaacaatgaattggttagaactaa 2905

                                                                        
Query: 348  cactttgaccaaggcagctatcgttcaaatcgatgctaccccattcagacaatggtacga 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 cactttgaccaaggcagctatcgttcaaatcgatgctaccccattcagacaatggtacga 2845

                                                                        
Query: 408  atctcactacggtcaatctttgggtaagaagaagaacactaaggctgaagaagaaaccgc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 atctcactacggtcaatctttgggtaagaagaagaacactaaggctgaagaagaaaccgc 2785

                                                                        
Query: 468  caccacctctaagaacactgaaagaaagtgggctgccagagctgctgaagctaagatcga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 caccacctctaagaacactgaaagaaagtgggctgccagagctgctgaagctaagatcga 2725

                                                                        
Query: 528  acacgccgttgactctcaattcggtgctggtagattgtacgctgctatctcttccagacc 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 acacgccgttgactctcaattcggtgctggtagattgtacgctgctatctcttccagacc 2665

                                                                        
Query: 588  aggtcaatccggtagatgtgatggttacattttggaaggtgaagaattggccttctactt 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 aggtcaatccggtagatgtgatggttacattttggaaggtgaagaattggccttctactt 2605

                                                                        
Query: 648  gagaagattgactgctaagaaataagtcaactccttcgcaaattaacatatacgccaatt 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 gagaagattgactgctaagaaataagtcaactccttcgcaaattaacatatacgccaatt 2545

                                                                        
Query: 708  tatcaaaactccttattaaccgttattatcacagccaaaggttcntttggtcattttata 767
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2544 tatcaaaactccttattaaccgttattatcacagccaaaggttcttttggtcattttata 2485

                                                                        
Query: 768  tctttacaaatgtataaaatataataagtcatagtattnttacttataactttctcagtt 827
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2484 tctttacaaatgtataaaatataataagtcatagtatttttacttataactttctcagtt 2425

                                                               
Query: 828  tcagtaccatcagtacttatgcaaggtagttaaaactctggctccgattac 878
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 tcagtaccatcagtacttatgcaaggtagttaaaactctggctccgattac 2374


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6723
Number of Sequences: 1807
Number of extensions: 6723
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)