BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZD07RM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1467 1635 0.0 >3x_Contig1467 Length = 7717 Score = 1635 bits (825), Expect = 0.0 Identities = 829/831 (99%) Strand = Plus / Minus Query: 48 ttatctacagtaaagcaaaatgggtatttctcgtgattctcgtcacaaaagagctgctac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3204 ttatctacagtaaagcaaaatgggtatttctcgtgattctcgtcacaaaagagctgctac 3145 Query: 108 cggtgctaaacgtgctcaattcagaaagaagagaaagttcgaattaggccgtcaagctgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3144 cggtgctaaacgtgctcaattcagaaagaagagaaagttcgaattaggccgtcaagctgc 3085 Query: 168 caacaccaagatcggtactaagagaattcatcctgttagaaccagaggtggtaaccagaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3084 caacaccaagatcggtactaagagaattcatcctgttagaaccagaggtggtaaccagaa 3025 Query: 228 gttcagagctttgagaattgaaactggtaacttctcctgggcttccgaaggtgtcgctag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3024 gttcagagctttgagaattgaaactggtaacttctcctgggcttccgaaggtgtcgctag 2965 Query: 288 aaagaccagaatcactggtgtcgtctaccatccatccaacaatgaattggttagaactaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2964 aaagaccagaatcactggtgtcgtctaccatccatccaacaatgaattggttagaactaa 2905 Query: 348 cactttgaccaaggcagctatcgttcaaatcgatgctaccccattcagacaatggtacga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2904 cactttgaccaaggcagctatcgttcaaatcgatgctaccccattcagacaatggtacga 2845 Query: 408 atctcactacggtcaatctttgggtaagaagaagaacactaaggctgaagaagaaaccgc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2844 atctcactacggtcaatctttgggtaagaagaagaacactaaggctgaagaagaaaccgc 2785 Query: 468 caccacctctaagaacactgaaagaaagtgggctgccagagctgctgaagctaagatcga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 caccacctctaagaacactgaaagaaagtgggctgccagagctgctgaagctaagatcga 2725 Query: 528 acacgccgttgactctcaattcggtgctggtagattgtacgctgctatctcttccagacc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2724 acacgccgttgactctcaattcggtgctggtagattgtacgctgctatctcttccagacc 2665 Query: 588 aggtcaatccggtagatgtgatggttacattttggaaggtgaagaattggccttctactt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2664 aggtcaatccggtagatgtgatggttacattttggaaggtgaagaattggccttctactt 2605 Query: 648 gagaagattgactgctaagaaataagtcaactccttcgcaaattaacatatacgccaatt 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2604 gagaagattgactgctaagaaataagtcaactccttcgcaaattaacatatacgccaatt 2545 Query: 708 tatcaaaactccttattaaccgttattatcacagccaaaggttcntttggtcattttata 767 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2544 tatcaaaactccttattaaccgttattatcacagccaaaggttcttttggtcattttata 2485 Query: 768 tctttacaaatgtataaaatataataagtcatagtattnttacttataactttctcagtt 827 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2484 tctttacaaatgtataaaatataataagtcatagtatttttacttataactttctcagtt 2425 Query: 828 tcagtaccatcagtacttatgcaaggtagttaaaactctggctccgattac 878 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2424 tcagtaccatcagtacttatgcaaggtagttaaaactctggctccgattac 2374 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6723 Number of Sequences: 1807 Number of extensions: 6723 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)