BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZD10FM1.SCF screened BAC_end (886 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1560 0.0 >3x_Contig1610 Length = 13981 Score = 1560 bits (787), Expect = 0.0 Identities = 794/795 (99%), Gaps = 1/795 (0%) Strand = Plus / Plus Query: 86 caaagaatttctttccttcacatctatttatcaaacaaaaacaactagaaaacatttcgt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3281 caaagaatttctttccttcacatctatttatcaaacaaaaacaactagaaaacatttcgt 3340 Query: 146 aaacaaaagaacttaggatccaagaaacagggaaacatttcactttgtatccttgcgttt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3341 aaacaaaagaacttaggatccaagaaacagggaaacatttcactttgtatccttgcgttt 3400 Query: 206 aggtgtcttgtgcaagggagaacggttcgtgagacacttgatcgagagttcatactcaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3401 aggtgtcttgtgcaagggagaacggttcgtgagacacttgatcgagagttcatactcaga 3460 Query: 266 aactcgttagtaggcgccgaataattacagaataaaggaagatctaacgtcgctattcga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3461 aactcgttagtaggcgccgaataattacagaataaaggaagatctaacgtcgctattcga 3520 Query: 326 tatactgatacttttataaagtgaaccaagtgtgaaaatttattatttgccgtttgctgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3521 tatactgatacttttataaagtgaaccaagtgtgaaaatttattatttgccgtttgctgt 3580 Query: 386 tgcagttccttgttttatttctataattttggagactgactattgaaacgacccgctagg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3581 tgcagttccttgttttatttctataattttggagactgactattgaaacgacccgctagg 3640 Query: 446 atttggaaacactagtaagttataataccctttacaaatcgttatgtcagcttccgaggt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3641 atttggaaacactagtaagttataataccctttacaaatcgttatgtcagcttccgaggt 3700 Query: 506 tgcccagtttttggaaaacattatcattactccggacccaacggtccgtcttcaagcgga 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3701 tgcccagtttttggaaaacattatcattactccggacccaacggtccgtcttcaagcgga 3760 Query: 566 gacgacgttgaagaaattatctaacgataatttcttgcaattcgctggacttttgtctca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3761 gacgacgttgaagaaattatctaacgataatttcttgcaattcgctggacttttgtctca 3820 Query: 626 gatcttggccgatgtgtccgttcgtcttgaagctagaattctagcaggtttgacgttgaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3821 gatcttggccgatgtgtccgttcgtcttgaagctagaattctagcaggtttgacgttgaa 3880 Query: 686 gaacgaattgatttcgaagaacccaacaaaggcccagcagtttgctcaacgttggtctac 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3881 gaacgaattgatttcgaagaacccaacaaaggcccagcagtttgctcaacgttggtctac 3940 Query: 746 gcaagtcgatgcagagtctagacatcatattaagcagtttgcgttacaagcgttggttga 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3941 gcaagtcgatgcagagtctagacatcatattaagcagtttgcgttacaagcgttggttga 4000 Query: 806 tccagagactcgtgttgccaacgcttcagctcagttgatcgctgccattgcagagatcga 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4001 tccagagactcgtgttgccaacgcttcagctcagttgatcgctgccattgcagagatcga 4060 Query: 866 a-tgccattgaatca 879 | ||||||||||||| Sbjct: 4061 attgccattgaatca 4075 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6101 Number of Sequences: 1807 Number of extensions: 6101 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 886 length of database: 10,358,551 effective HSP length: 16 effective length of query: 870 effective length of database: 10,329,639 effective search space: 8986785930 effective search space used: 8986785930 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)