BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZD12FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1770                                                        1550   0.0  

>3x_Contig1770 
          Length = 29267

 Score = 1550 bits (782), Expect = 0.0
 Identities = 831/847 (98%), Gaps = 1/847 (0%)
 Strand = Plus / Plus

                                                                         
Query: 85    aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 144
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19129 aaaccagccttccaaacaggtgtcactgatagtgaacggaacataatcatactgagtttc 19188

                                                                         
Query: 145   cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 204
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19189 cgagtcgcgttcctgtcttggtggtactatggtaatatgtccgacacactcttttgaagc 19248

                                                                         
Query: 205   aatctttgacacttttgtatagaaactgcgggaaccagtataactaccaagccggaacga 264
             ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19249 aatctttgacacttaagtatagaaactgcgggaaccagtataactaccaagccggaacga 19308

                                                                         
Query: 265   tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 324
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19309 tgacagccaactctggattgactatctatgtgcaattgagaataacgaccagaggagctg 19368

                                                                         
Query: 325   ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 384
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19369 ccagatggtagatcctaaagagcagatatggtagaggttaaagcttaaatttgaaatgct 19428

                                                                         
Query: 385   gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19429 gccgaatcgaaattataaactgtggtgtcggatccaatgatgcagtgtcacgtgatgcga 19488

                                                                         
Query: 445   cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 504
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19489 cgggaataagagtcattggcctcaaaccaagggagggatagcgactggcgaggggagacg 19548

                                                                         
Query: 505   gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 564
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19549 gactcaaccacacaagtacaaatgtgtaattgtgtttttgtccactgtactatgtgaatt 19608

                                                                         
Query: 565   gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 624
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19609 gaaaccttcctacataataagagtttgagaattccaagttgattcctcatacgtaatgat 19668

                                                                         
Query: 625   atataatgatattcgatagtatacacacacattctatatggggacagaagtatttcttca 684
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19669 atataatgatattcgatagtatacacacacattctatatggggacagaagtatttcttca 19728

                                                                         
Query: 685   taggtatggctgcacgtcttctccatcatagattgtgaaccggtttatcgtgtcctacaa 744
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 19729 taggtatggctgcacgtcttctccatcatagattgtgaa-cggtttatcgtgtcctacaa 19787

                                                                         
Query: 745   tggcaatggataagttcttggtactcaaagtttcgtctttcanaaagtgtcttagagcct 804
             |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 19788 tggcaatggataagttcttggtactcaaagtttcgtctttcaaagagtgtcttagagcct 19847

                                                                         
Query: 805   ctactccgtgcttgatcaactcatctgcatctttcatctcgcgggaatgatcgaacacac 864
             |||||||||||||||||||||||||||||||||  ||||||||| ||| ||||| |||||
Sbjct: 19848 ctactccgtgcttgatcaactcatctgcatcttcaatctcgcggaaatcatcgagcacac 19907

                                                                         
Query: 865   gttccatatatgtcttagcaccttgggaactancaccgatagctgtaccgtacaattgna 924
             |||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||  |
Sbjct: 19908 gttccagatatgtcttagcaccttgggacctagcaccgatagctgtcccgtacaattcga 19967

                    
Query: 925   gcgtgtt 931
             |||||||
Sbjct: 19968 gcgtgtt 19974


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5095
Number of Sequences: 1807
Number of extensions: 5095
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)