BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZE02RM1.SCF screened BAC_end (883 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1806 1550 0.0 >3x_Contig1806 Length = 53694 Score = 1550 bits (782), Expect = 0.0 Identities = 825/838 (98%), Gaps = 1/838 (0%) Strand = Plus / Minus Query: 41 gcttcggtaaatccaattggtgttagggtattcacagaattgtgttactcaaaaaatcgc 100 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 36274 gcttcggtaaatccaattggtgatagggtattcacagaattgtgttactcaaaaaatcgc 36215 Query: 101 tgtgagcaataaagtatgtgtttggtattttcaattatgcccaatcgaccacctataaga 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36214 tgtgagcaataaagtatgtgtttggtattttcaattatgcccaatcgaccacctataaga 36155 Query: 161 gtaatattacccatcactaattactacagcggcttcccggtattattattatgttctgat 220 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 36154 gtaatattacccatcactaattactacagcggcttcccggtattattattaggtactgat 36095 Query: 221 ttacttctcaaaatatgggaagtgaaattctatcactgggtttaatcgtatttgaaaaat 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36094 ttacttctcaaaatatgggaagtgaaattctatcactgggtttaatcgtatttgaaaaat 36035 Query: 281 atcatccgctccagtagaaccctttgccaatgtttattgtactattggtgatatataaac 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36034 atcatccgctccagtagaaccctttgccaatgtttattgtactattggtgatatataaac 35975 Query: 341 gttaattgaattgaagatcttatatgcattcattaaaagagacaccatttacttcctgtt 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35974 gttaattgaattgaagatcttatatgcattcattaaaagagacaccatttacttcctgtt 35915 Query: 401 aattttgagtagtaaatttttgttttcgttcattcattcacttttctgtgcaattcatcc 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35914 aattttgagtagtaaatttttgttttcgttcattcattcacttttctgtgcaattcatcc 35855 Query: 461 cttcatcgcccaactcctgtcctgcaactctgtcggtacggaatatccccatacattaat 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35854 cttcatcgcccaactcctgtcctgcaactctgtcggtacggaatatccccatacattaat 35795 Query: 521 taaatgagattagaatactattttgcgttggtcgcaactctatggctaactactgtctat 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35794 taaatgagattagaatactattttgcgttggtcgcaactctatggctaactactgtctat 35735 Query: 581 gcagcttctgaaaaattcggtcttaagcttactggaccaaacgaattaaaaggaatgatg 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35734 gcagcttctgaaaaattcggtcttaagcttactggaccaaacgaattaaaaggaatgatg 35675 Query: 641 atttatgaagacggaagctcgctttttattggtaaacattccggtgatatcatagaaggt 700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35674 atttatgaagacggaagctcgctttttattggtaaacattccggtgatatcatagaaggt 35615 Query: 701 acatttcaaggagatgggtccttgaaattgggcactggagagttatttgggataaacaag 760 ||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 35614 acaattcaagaggatgggtccttgaaattgggcactggagagttcattgggataaacaag 35555 Query: 761 aactatctaactttaaccactaactatacccaatacgctacgccatttgctatcaatggg 820 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35554 aactatctaactttaaccactaactatacccaatacgctacgccatttgctatcaatggg 35495 Query: 821 gatggatatttgacgctggatggagaaaaa-aatttaaggccatcccaaccggtcaga 877 |||||||||||||||||| ||||||||||| |||| |||||||| |||| |||||||| Sbjct: 35494 gatggatatttgacgctgtatggagaaaaagaattcaaggccattccaagcggtcaga 35437 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6960 Number of Sequences: 1807 Number of extensions: 6960 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 883 length of database: 10,358,551 effective HSP length: 16 effective length of query: 867 effective length of database: 10,329,639 effective search space: 8955797013 effective search space used: 8955797013 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)