BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZE05RM1.SCF screened BAC_end (890 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1475 1582 0.0 >3x_Contig1475 Length = 10676 Score = 1582 bits (798), Expect = 0.0 Identities = 838/848 (98%), Gaps = 3/848 (0%) Strand = Plus / Plus Query: 44 gcttctccatcgatggtgctggtatcgggaaagatatacccacagaaaaatggattcagt 103 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2880 gcttctccatcgatggtgctgg-atcgggaaagatatacccacagaaaaatggattcagt 2938 Query: 104 gtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatgtct 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2939 gtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatgtct 2998 Query: 164 acatcgccacattatactgaagaagctgtgaaagataacacgactcctgctaaccttgta 223 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| Sbjct: 2999 acatcgccacattatactgaagaagctgtgaaagataacacgaatactgctaaccgtgta 3058 Query: 224 tggaattacagtggttcttctgctccccaaccgccactgagttttaatgtcacgccatca 283 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3059 tggaattacagtggttcttctgctcnccaaccgccactgagttttaatgtcacgccatca 3118 Query: 284 ttttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtacaat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3119 ttttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtacaat 3178 Query: 344 aggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggctct 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3179 aggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggctct 3238 Query: 404 gtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactgtct 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3239 gtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactgtct 3298 Query: 464 tccactaacaccaatggcagttctactgattccagagaaaatagtaacggccttaatgaa 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3299 tccactaacaccaatggcagttctactgattccagagaaaatagtaacggccttaatgaa 3358 Query: 524 gctcctaaacttaatgtccagaatctgtccactttcaactatttacagaacgcttcgcat 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3359 gctcctaaacttaatgtccagaatctgtccactttcaactatttacagaacgcttcgcat 3418 Query: 584 gattctcaaataagtatatttgccagggacagtgttgttatgtcatcccaggcgaacaac 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3419 gattctcaaataagtatatttgccagggacagtgttgttatgtcatcccaggcgaacaac 3478 Query: 644 tccgctggtctgtacgaacaagctcaacagagaacatatatgggctcccaatatgcccaa 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3479 tccgctggtctgtacgaacaagctcaacagagaacatatatgggctcccaatatgcccaa 3538 Query: 704 ttccataatccattcacttcgttctcaccacaatttgacaacttgncaaatcaagaaaa- 762 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3539 ttccataatccattcacttcgttctcaccacaatttgacaacttgcaaaatcaagaaaac 3598 Query: 763 catcctcagaattcaactaatatcagaaggggactctcaattctttcccaataacaatgt 822 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3599 catcctcagaattcaactaatatcagaa-gggactctcaattctttcccaataacaatgt 3657 Query: 823 ctccattgcaggggatcgtttgccttcaatggctgaaaaggctgatgatcaattcaattt 882 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3658 ctccattgcaggggatcgtttgccttcaatggctgaaaaggctgatgatcaattcaactt 3717 Query: 883 tttctttt 890 |||||||| Sbjct: 3718 tttctttt 3725 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6724 Number of Sequences: 1807 Number of extensions: 6724 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 890 length of database: 10,358,551 effective HSP length: 16 effective length of query: 874 effective length of database: 10,329,639 effective search space: 9028104486 effective search space used: 9028104486 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)