BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZE05RM1.SCF screened BAC_end
         (890 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1475                                                        1582   0.0  

>3x_Contig1475 
          Length = 10676

 Score = 1582 bits (798), Expect = 0.0
 Identities = 838/848 (98%), Gaps = 3/848 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   gcttctccatcgatggtgctggtatcgggaaagatatacccacagaaaaatggattcagt 103
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2880 gcttctccatcgatggtgctgg-atcgggaaagatatacccacagaaaaatggattcagt 2938

                                                                        
Query: 104  gtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatgtct 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 gtggctttcactactagagagaacagtaacgcatcaggtggaagtagtatggacatgtct 2998

                                                                        
Query: 164  acatcgccacattatactgaagaagctgtgaaagataacacgactcctgctaaccttgta 223
            ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct: 2999 acatcgccacattatactgaagaagctgtgaaagataacacgaatactgctaaccgtgta 3058

                                                                        
Query: 224  tggaattacagtggttcttctgctccccaaccgccactgagttttaatgtcacgccatca 283
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3059 tggaattacagtggttcttctgctcnccaaccgccactgagttttaatgtcacgccatca 3118

                                                                        
Query: 284  ttttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtacaat 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 ttttccgtctcaaccacagttgaaagaagtgagaatgaaaaatctttcagtttgtacaat 3178

                                                                        
Query: 344  aggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggctct 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 aggaccgagatgtcaaatcacggcaacaacagtgctagcacaaatactagcaatggctct 3238

                                                                        
Query: 404  gtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactgtct 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 gtttcatctcctttttcatctatccatgttcaaagttcgtcctcttcgataccactgtct 3298

                                                                        
Query: 464  tccactaacaccaatggcagttctactgattccagagaaaatagtaacggccttaatgaa 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 tccactaacaccaatggcagttctactgattccagagaaaatagtaacggccttaatgaa 3358

                                                                        
Query: 524  gctcctaaacttaatgtccagaatctgtccactttcaactatttacagaacgcttcgcat 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 gctcctaaacttaatgtccagaatctgtccactttcaactatttacagaacgcttcgcat 3418

                                                                        
Query: 584  gattctcaaataagtatatttgccagggacagtgttgttatgtcatcccaggcgaacaac 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3419 gattctcaaataagtatatttgccagggacagtgttgttatgtcatcccaggcgaacaac 3478

                                                                        
Query: 644  tccgctggtctgtacgaacaagctcaacagagaacatatatgggctcccaatatgcccaa 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3479 tccgctggtctgtacgaacaagctcaacagagaacatatatgggctcccaatatgcccaa 3538

                                                                        
Query: 704  ttccataatccattcacttcgttctcaccacaatttgacaacttgncaaatcaagaaaa- 762
            |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| 
Sbjct: 3539 ttccataatccattcacttcgttctcaccacaatttgacaacttgcaaaatcaagaaaac 3598

                                                                        
Query: 763  catcctcagaattcaactaatatcagaaggggactctcaattctttcccaataacaatgt 822
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3599 catcctcagaattcaactaatatcagaa-gggactctcaattctttcccaataacaatgt 3657

                                                                        
Query: 823  ctccattgcaggggatcgtttgccttcaatggctgaaaaggctgatgatcaattcaattt 882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3658 ctccattgcaggggatcgtttgccttcaatggctgaaaaggctgatgatcaattcaactt 3717

                    
Query: 883  tttctttt 890
            ||||||||
Sbjct: 3718 tttctttt 3725


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6724
Number of Sequences: 1807
Number of extensions: 6724
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)