BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZE10FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1193 1382 0.0 >3x_Contig1193 Length = 4968 Score = 1382 bits (697), Expect = 0.0 Identities = 785/804 (97%), Gaps = 8/804 (0%) Strand = Plus / Minus Query: 88 gaggttttcctcttctgcagtagtatccacaataaagaagaaaattggtggaacttggac 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2803 gaggttttcctcttctgcagtagtatccacaataaagaagaaaattggtggaacttggac 2744 Query: 148 aggaacactggtgatatattcaactgtagtattagtcaattccagtggtaaagtttcctg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2743 aggaacactggtgatatattcaactgtagtattagtcaattccagtggtaaagtttcctg 2684 Query: 208 cgtcatattggcataatgttgaggaagaatgtttcttgtcttacaaataggacaagtcca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2683 cgtcatattggcataatgttgaggaagaatgtttcttgtcttacaaataggacaagtcca 2624 Query: 268 ggtattggatctaacatcgatctcacagtaaggatttaacacagatttacagttgatgtt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2623 ggtattggatctaacatcgatctcacagtaaggatttaacacagatttacagttgatgtt 2564 Query: 328 accacataccacaggattatagccagcaacagcaagatcttcacgttccttcaaaggagt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2563 accacataccacaggattatagccagcaacagcaagatcttcacgttccttcaaaggagt 2504 Query: 388 gtataaacatccaactggaaccacattcttattagcgtcagttcttgacgctggaaacac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2503 gtataaacatccaactggaaccacattcttattagcgtcagttcttgacgctggaaacac 2444 Query: 448 gttccatgagaaacgaacaccgttaatatcttcgttttgttcgaaatccatggtgctaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2443 gttccatgagaaacgaacaccgttaatatcttcgttttgttcgaaatccatggtgctaaa 2384 Query: 508 tctcttgattccaatctataagcagttggaaaagaatgtataaatcttctatgtggttca 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2383 tctcttgattccaatctataagcagttggaaaagaatgtataaatcttctatgtggttca 2324 Query: 568 aacagatcaaatccctagcactcaccttagcctgagcaattggacttttacaggctactc 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2323 aacagatcaaatccctagcactcaccttagcctgagcaattggacttttacaggctactc 2264 Query: 628 tggttctctttttgttgtgttgataaatcctgtgtattgctagatattnttttcatcaaa 687 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2263 tggttctctttttgttgtgttgataaatcctgtgtattgctagatatttttttcatcaaa 2204 Query: 688 acatttctttcagggtcag-aaatgccaaataatgcaaaacaaaaaatgacccactaagg 746 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2203 acatttctttcaaggtcagaaaatgccaaataatgcaaaacaaaaaatgacccactaagg 2144 Query: 747 aaaagcttgaactcagaactctgtgcctcaatgctgtaaaattatcggttaaacacagtt 806 ||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||||| | Sbjct: 2143 aaaggcttgaactcagatctctgtgcctcagtgctgtaagattatcggttaaacacag-t 2085 Query: 807 tttggtgtggactaaaccttgacatccgactgcaggtttgcaaaattcttgctgttttta 866 ||| ||| ||||||||| |||||| |||||||||| ||||||||||| ||||| ||||| Sbjct: 2084 attgttgt-gactaaacc-tgacattcgactgcagg-ttgcaaaattc-tgctg-tttta 2030 Query: 867 aaagcgagtttctttaatcacgtg 890 |||||||| || ||||||||||| Sbjct: 2029 gaagcgagtatc-ttaatcacgtg 2007 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7124 Number of Sequences: 1807 Number of extensions: 7124 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)