BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC25ZF01FM1.SCF screened BAC_end
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1697 1574 0.0
>3x_Contig1697
Length = 16220
Score = 1574 bits (794), Expect = 0.0
Identities = 804/808 (99%)
Strand = Plus / Plus
Query: 87 ctcattcccggcaaactattcgtcaatgttcaaaggatacaatggtatggctccagaagc 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15382 ctcattcccggcaaactattcgtcaatgttcaaaggatacaatggtatggctccagaagc 15441
Query: 147 tgtgggtgatcatatccaacgtgagaatgagagtgagaatctattcaatcagttacgaaa 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15442 tgtgggtgatcatatccaacgtgagaatgagagtgagaatctattcaatcagttacgaaa 15501
Query: 207 ctacaagattagctcggaaaataattcagtaagtttcgatgacgatgccgactccgacag 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15502 ctacaagattagctcggaaaataattcagtaagtttcgatgacgatgccgactccgacag 15561
Query: 267 gttcaagtctgcatttctggcccacagcaggaaatcaagtattgattctccaactatgca 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15562 gttcaagtctgcatttctggcccacagcaggaaatcaagtattgattctccaactatgca 15621
Query: 327 gttacgagacttcaaaaagcgtcgtccttcatctctgatttcaggatcttcgcttacttc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15622 gttacgagacttcaaaaagcgtcgtccttcatctctgatttcaggatcttcgcttacttc 15681
Query: 387 taaccccgtaagtgtaacccaattatcgcccagatcaacttttcataaaagagcaaccgc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15682 taaccccgtaagtgtaacccaattatcgcccagatcaacttttcataaaagagcaaccgc 15741
Query: 447 aatgactgattcacaggaaatggtttcagttgatgattttactccaaaaggaaggcaatc 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15742 aatgactgattcacaggaaatggtttcagttgatgattttactccaaaaggaaggcaatc 15801
Query: 507 tgatacggatatccatgatccagattcaggagattatctagatgataagagacctacaca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15802 tgatacggatatccatgatccagattcaggagattatctagatgataagagacctacaca 15861
Query: 567 atccctaagaaccctgtctttggatgatggttcttcagagacaatcagcaagcattcgtt 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15862 atccctaagaaccctgtctttggatgatggttcttcagagacaatcagcaagcattcgtt 15921
Query: 627 agttccttcgccaaaattgacaatagaaaacactaaagaacagatgcgtagaaattcaaa 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15922 agttccttcgccaaaattgacaatagaaaacactaaagaacagatgcgtagaaattcaaa 15981
Query: 687 tggacattttgagaatttccatcaattcgcaaagctgaatggattagatagatataattc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15982 tggacattttgagaatttccatcaattcgcaaagctgaatggattagatagatataattc 16041
Query: 747 agtttttgccaacttacctgaaactggtgacaatgtttcaaactcagtaataaatttgga 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16042 agtttttgccaacttacctgaaactggtgacaatgtttcaaactcagtaataaatttgga 16101
Query: 807 tttcgtgaacgatttcagacttcanaaacccccaagaaccaanaaatacagaccactttt 866
||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||
Sbjct: 16102 tttcgtgaacgatttcagactccaaaaacccccaagaaccaaaaaatacagaccacattt 16161
Query: 867 cgaacaaagactctcaactgctatttca 894
||||||||||||||||||||||||||||
Sbjct: 16162 cgaacaaagactctcaactgctatttca 16189
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5768
Number of Sequences: 1807
Number of extensions: 5768
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)