BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZF03RM1.SCF screened BAC_end (939 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1559 1499 0.0 >3x_Contig1559 Length = 10415 Score = 1499 bits (756), Expect = 0.0 Identities = 788/800 (98%) Strand = Plus / Plus Query: 48 gcttcggtataagagcatatattgtgacacattctctgtccttcaggcagttattagagc 107 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 9605 gcttcggtataagagcatatatggggacacattctctgtccttcaggcagttattagagc 9664 Query: 108 caaattacaaagaggaaactttatgtcctaccataatatatcgaacatagtctctagcga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9665 caaattacaaagaggaaactttatgtcctaccataatatatcgaacatagtctctagcga 9724 Query: 168 agcatccgcgctacaggctttatctcgtggaagaatcgtaaggcttaggatgattttatc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 9725 agcatccgcgctacaggctttatctcgtggaagaatcgtaaggcttaggatgatggaagc 9784 Query: 228 atcaagtggtgatctacagataaaattacaggctttactgaggggtgcttttcaaagaag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9785 atcaagtggtgatctacagataaaattacaggctttactgaggggtgcttttcaaagaag 9844 Query: 288 taagctgcaaagggtaaaagaagtaatgtcatgcgatcaattccaaaactttgggcctat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9845 taagctgcaaagggtaaaagaagtaatgtcatgcgatcaattccaaaactttgggcctat 9904 Query: 348 cttgaaaggttatattgttgcaaggagatacactgacgccccaagtaaagttgctaatga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9905 cttgaaaggttatattgttgcaaggagatacactgacgccccaagtaaagttgctaatga 9964 Query: 408 aattgtcagctttaatgcagtggtaaaggggatgctgacaaggtttgccatggaactcat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9965 aattgtcagctttaatgcagtggtaaaggggatgctgacaaggtttgccatggaactcat 10024 Query: 468 tatagatattgccgaacaaaacaacattgatagtttacaatccaaagtattaggctattt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10025 tatagatattgccgaacaaaacaacattgatagtttacaatccaaagtattaggctattt 10084 Query: 528 aatcagaaaacgagtaagccagaagaagagcttctacaaaatgcgtgaatctgagatcat 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10085 aatcagaaaacgagtaagccagaagaagagcttctacaaaatgcgtgaatctgagatcat 10144 Query: 588 cattatacaaaaaaatatcagaagatatcaactacaaaacgcatacaaagttttaatgtc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10145 cattatacaaaaaaatatcagaagatatcaactacaaaacgcatacaaagttttaatgtc 10204 Query: 648 aacgggcagtccgaagttaagtacggttagaaaattcgttcacattcttaatcaatcaga 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10205 aacgggcagtccgaagttaagtacggttagaaaattcgttcacattcttaatcaatcaga 10264 Query: 708 taacgaactattctctgctaacctnncaaagctcaaggctaatattaatgatgttaatga 767 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10265 taacgaactattctctgctaacctccaaaagctcaaggctaatattaatgatgttaatga 10324 Query: 768 tgaagtangagaactgcaagaatcgttgagaaagaaggttttgatgaaagaatcacttga 827 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10325 tgaagtaggagaactgcaagaatcgttgagaaagaaggttttgatgaaagattcacttga 10384 Query: 828 naagagaagaattgatgtgt 847 ||||||||||||||||||| Sbjct: 10385 aaagagaagaattgatgtgt 10404 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7050 Number of Sequences: 1807 Number of extensions: 7050 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 939 length of database: 10,358,551 effective HSP length: 16 effective length of query: 923 effective length of database: 10,329,639 effective search space: 9534256797 effective search space used: 9534256797 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)