BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZF05FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1659 1511 0.0 >3x_Contig1659 Length = 17570 Score = 1511 bits (762), Expect = 0.0 Identities = 825/837 (98%), Gaps = 7/837 (0%) Strand = Plus / Plus Query: 87 atcggtgtattttgtctcattgttgaatcgttcacataaattcacagctaaattgcaatc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5003 atcggtgtattttgtctcattgttgaatcgttcacataaattcacagctaaattgcaatc 5062 Query: 147 caaggagaaggcatgtgaaactagttcagctggaagttttagatcttcattttcgtgctt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5063 caaggagaaggcatgtgaaactagttcagctggaagttttagatcttcattttcgtgctt 5122 Query: 207 agcaaatggttttaaccatgtacgcaagaggaacacctcgttcagcatgaaatactccaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5123 agcaaatggttttaaccatgtacgcaagaggaacacctcgttcagcatgaaatactccaa 5182 Query: 267 taggacgtaagagttcccagtatgctttactaataactgggagtggtttttgaattgctg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5183 taggacgtaagagttcccagtatgctttactaataactgggagtggtttttgaattgctg 5242 Query: 327 atataaatcaaccattagagttaaatcggccttgatttttgcttcattgcctcctagtgg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5243 atataaatcaaccattagagttaaatcggccttgatttttgcttcattgcctcctagtgg 5302 Query: 387 ccaagttggacgaactttaaaccaagacaaagcacccttgacaagcgcttgagctagttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5303 ccaagttggacgaactttaaaccaagacaaagcacccttgacaagcgcttgagctagttt 5362 Query: 447 tttcacgtcgcttgtgttcttcttctcattgactagtaatactaagatagcaaacctaat 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5363 tttcacgtcgcttgtgttcttcttctcattgactagtaatactaagatagcaaacctaat 5422 Query: 507 tagctcatgacggaccattcttgcaaatggatgtaaactagcatgctctaggttagaaac 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5423 tagctcatgacggaccattcttgcaaatggatgtaaactagcatgctctaggttagaaac 5482 Query: 567 accatgatacgctacatgggtgaataacttcaaaagatgatcactttcgtatacggtagc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5483 accatgatacgctacatgggtgaataacttcaaaagatgatcactttcgtatacggtagc 5542 Query: 627 ttcgaaatgggatgcaaagaatctaattacgtgtaaatgaggcttcaacaccccacttac 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5543 ttcgaaatgggatgcaaagaatctaattacgtgtaaatgaggcttcaacaccccacttac 5602 Query: 687 tctcttattttcctttttgattgcatccatatcataaggtttgtattccatcttcacaaa 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5603 tctcttattttcctttttgattgcatccatatcataaggtttgtattccatcttcacaaa 5662 Query: 747 ttc-acatcctgcttatc-atgggacggttgtacaacccg-acttatcattgatgga-tt 802 ||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||| || Sbjct: 5663 ttcaacatcctgcttatcaatggaacggttgtacaacccgaacttatcattgatggattt 5722 Query: 803 acaccaaaatgtggcgatttcagagacaagc-aatgtggcacatctttacgctccttgat 861 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 5723 acaccaaaatgtggcgatttcagagacaagcaaatgtgcaacatctttacgctccttgat 5782 Query: 862 gaac-aaagccaaac-tttgtagccactttcatagtattgctgngggacgtttggaa 916 |||| |||||||||| ||||||||||||||||||||||||||| || |||||||||| Sbjct: 5783 gaacgaaagccaaacatttgtagccactttcatagtattgctgtggaacgtttggaa 5839 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5648 Number of Sequences: 1807 Number of extensions: 5648 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)