BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZF05FM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1659                                                        1511   0.0  

>3x_Contig1659 
          Length = 17570

 Score = 1511 bits (762), Expect = 0.0
 Identities = 825/837 (98%), Gaps = 7/837 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   atcggtgtattttgtctcattgttgaatcgttcacataaattcacagctaaattgcaatc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5003 atcggtgtattttgtctcattgttgaatcgttcacataaattcacagctaaattgcaatc 5062

                                                                        
Query: 147  caaggagaaggcatgtgaaactagttcagctggaagttttagatcttcattttcgtgctt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5063 caaggagaaggcatgtgaaactagttcagctggaagttttagatcttcattttcgtgctt 5122

                                                                        
Query: 207  agcaaatggttttaaccatgtacgcaagaggaacacctcgttcagcatgaaatactccaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5123 agcaaatggttttaaccatgtacgcaagaggaacacctcgttcagcatgaaatactccaa 5182

                                                                        
Query: 267  taggacgtaagagttcccagtatgctttactaataactgggagtggtttttgaattgctg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5183 taggacgtaagagttcccagtatgctttactaataactgggagtggtttttgaattgctg 5242

                                                                        
Query: 327  atataaatcaaccattagagttaaatcggccttgatttttgcttcattgcctcctagtgg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5243 atataaatcaaccattagagttaaatcggccttgatttttgcttcattgcctcctagtgg 5302

                                                                        
Query: 387  ccaagttggacgaactttaaaccaagacaaagcacccttgacaagcgcttgagctagttt 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 ccaagttggacgaactttaaaccaagacaaagcacccttgacaagcgcttgagctagttt 5362

                                                                        
Query: 447  tttcacgtcgcttgtgttcttcttctcattgactagtaatactaagatagcaaacctaat 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 tttcacgtcgcttgtgttcttcttctcattgactagtaatactaagatagcaaacctaat 5422

                                                                        
Query: 507  tagctcatgacggaccattcttgcaaatggatgtaaactagcatgctctaggttagaaac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 tagctcatgacggaccattcttgcaaatggatgtaaactagcatgctctaggttagaaac 5482

                                                                        
Query: 567  accatgatacgctacatgggtgaataacttcaaaagatgatcactttcgtatacggtagc 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5483 accatgatacgctacatgggtgaataacttcaaaagatgatcactttcgtatacggtagc 5542

                                                                        
Query: 627  ttcgaaatgggatgcaaagaatctaattacgtgtaaatgaggcttcaacaccccacttac 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 ttcgaaatgggatgcaaagaatctaattacgtgtaaatgaggcttcaacaccccacttac 5602

                                                                        
Query: 687  tctcttattttcctttttgattgcatccatatcataaggtttgtattccatcttcacaaa 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5603 tctcttattttcctttttgattgcatccatatcataaggtttgtattccatcttcacaaa 5662

                                                                        
Query: 747  ttc-acatcctgcttatc-atgggacggttgtacaacccg-acttatcattgatgga-tt 802
            ||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||
Sbjct: 5663 ttcaacatcctgcttatcaatggaacggttgtacaacccgaacttatcattgatggattt 5722

                                                                        
Query: 803  acaccaaaatgtggcgatttcagagacaagc-aatgtggcacatctttacgctccttgat 861
            ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||
Sbjct: 5723 acaccaaaatgtggcgatttcagagacaagcaaatgtgcaacatctttacgctccttgat 5782

                                                                     
Query: 862  gaac-aaagccaaac-tttgtagccactttcatagtattgctgngggacgtttggaa 916
            |||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||
Sbjct: 5783 gaacgaaagccaaacatttgtagccactttcatagtattgctgtggaacgtttggaa 5839


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5648
Number of Sequences: 1807
Number of extensions: 5648
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)