BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZF11RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1313 1445 0.0 >3x_Contig1313 Length = 8010 Score = 1445 bits (729), Expect = 0.0 Identities = 817/841 (97%), Gaps = 4/841 (0%) Strand = Plus / Plus Query: 78 gattaagaaattgacacttttaaaaggctcctcgatcaccttaaacaggctataatcgat 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 gattaagaaattgacacttttaaaaggctcctcgatcaccttaaacaggctataatcgat 61 Query: 138 aatgtcagctgaagaagcaaacacgagatctaaagaaccaacgtcaattttctctgtccc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aatgtcagctgaagaagcaaacacgagatctaaagaaccaacgtcaattttctctgtccc 121 Query: 198 tgccgaaactatattagcttttttcattgaaccttcgacgagtaaaacgttgtctctatc 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tgccgaaactatattagcttttttcattgaaccttcgacgagtaaaacgttgtctctatc 181 Query: 258 tagtaatagtattttatcttcatctttcacatcattgataataaagttacactcaaaaaa 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tagtaatagtattttatcttcatctttcacatcattgataataaagttacactcaaaaaa 241 Query: 318 cccatacccctgcacatcttgctctactacccttacatggttctttttgaagtaatcaat 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 cccatacccctgcacatcttgctctactacccttacatggttctttttgaagtaatcaat 301 Query: 378 gtaaagtaatttcccggattgccatgttatagtgtcaatatcgcaacctagttgtaacag 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 gtaaagtaatttcccggattgccatgttatagtgtcaatatcgcaacctagttgtaacag 361 Query: 438 aacgttgaagtctaacttgaaaaaagccctctcgcgcttatgcaatgataacacgcacat 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 aacgttgaagtctaacttgaaaaaagccctctcgcgcttatgcaatgataacacgcacat 421 Query: 498 gagatgcattgacgttacaaatcctataagatcattggtactggagtaagtgagtttagc 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 gagatgcattgacgttacaaatcctataagatcattggtactggagtaagtgagtttagc 481 Query: 558 agtaaactttgggggtacgttatcaagtttatatgaacataccaactcgatatcatactt 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 agtaaactttgggggtacgttatcaagtttatatgaacataccaactcgatatcatactt 541 Query: 618 ttcagctgtctggtggtagtggaaatccatggagtatattttttcagaggcaaggcatag 677 ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||| Sbjct: 542 ttcagctgtctggtggtagtggaaatccatggagtatatctctccagaggcaaggcatag 601 Query: 678 aatgcacgtatcatttttatcagaacacttctggttaggtattactaacgcatttactat 737 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 602 aatgcacgtatcatttttatcagaacacttctggttaggtattactaacgcatctactat 661 Query: 738 tctggttggcgctaaaaatttagcatcggatcctagtacatgaatggttcggtctgttag 797 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 662 tctgtttggcgctaaaaatttagcatcggatcctagtacatgaatggttcgttctgttag 721 Query: 798 tattaataaggggttggggctattatttggaaatccttgcaggatcattcaattggttcc 857 |||||||||| |||| |||||| |||| | ||| ||||||| |||| |||||| ||||| Sbjct: 722 tattaataagtggtttgggcta-tattctggaatacttgcagtatca-tcaatttgttcc 779 Query: 858 ttatc-aaatcccaatcagccaaagaatcg-gccccttcaaatctgcaagtccgtttggc 915 |||| |||||||||||| |||||||||| ||||| || ||||||||||| |||||||| Sbjct: 780 atatcaaaatcccaatcaagcaaagaatcgagccccatcgaatctgcaagttcgtttggc 839 Query: 916 c 916 | Sbjct: 840 c 840 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6767 Number of Sequences: 1807 Number of extensions: 6767 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)