BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZG01FM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig928 1511 0.0 >3x_Contig928 Length = 1948 Score = 1511 bits (762), Expect = 0.0 Identities = 822/836 (98%), Gaps = 5/836 (0%) Strand = Plus / Plus Query: 88 agtgtatatttttatgatattacctatacaatactttctaaatgaacagcatagtcaata 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 agtgtatatttttatgatattacctatacaatactttctaaatgaacagcatagtcaata 217 Query: 148 gccatatccacggtatccccactctctatcctgtctggagttgaatcatttccaaatgtg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gccatatccacggtatccccactctctatcctgtctggagttgaatcatttccaaatgtg 277 Query: 208 ataacgccatggttgacgctccagtcacgttctttagcgaacgcctccatctccttttca 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ataacgccatggttgacgctccagtcacgttctttagcgaacgcctccatctccttttca 337 Query: 268 ttctcgaagaatagtagagtcttagcgttgaacaatggtaaggagctatatgcttgttca 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ttctcgaagaatagtagagtcttagcgttgaacaatggtaaggagctatatgcttgttca 397 Query: 328 gaattcaaagcaatttcctctcttatagcctctttcaaagtctttgtgaaaacattgaac 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 gaattcaaagcaatttcctctcttatagcctctttcaaagtctttgtgaaaacattgaac 457 Query: 388 tcttcaaccttagaacctgtttgtaacagatcccaagccttttgataagaaccttccatc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 tcttcaaccttagaacctgtttgtaacagatcccaagccttttgataagaaccttccatc 517 Query: 448 aaaagtctttccaactttactggataagagaggtacgaactctcttccaaattcgtaacg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 aaaagtctttccaactttactggataagagaggtacgaactctcttccaaattcgtaacg 577 Query: 508 tatctgctcaaaaactcaaattctgagtgaagtttagtgtaatcgttttgtgctagcaag 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 tatctgctcaaaaactcaaattctgagtgaagtttagtgtaatcgttttgtgctagcaag 637 Query: 568 attaataagtacaaacttatcaacttgaacttgctatctgaatcactcaattctttcaca 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 attaataagtacaaacttatcaacttgaacttgctatctgaatcactcaattctttcaca 697 Query: 628 tcagaaaagtagaatgcgcttaactgtgagtaatagttcatgaaagtttcaaaatcctca 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 tcagaaaagtagaatgcgcttaactgtgagtaatagttcatgaaagtttcaaaatcctca 757 Query: 688 cagtatatgcttgaaagtgctcctatctcaagtatcttctttgctatattcagatcctgt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 cagtatatgcttgaaagtgctcctatctcaagtatcttctttgctatattcagatcctgt 817 Query: 748 agatagctttgatttttccttagacgc-tttgatatcaggtattaacaattttgctttaa 806 |||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 818 agatagctttga-ttttccttag-cgcttttgatatcaggtattaacaattttgctttaa 875 Query: 807 tcaatncaatcttgataggagatagtaatctcaaacttgtttcatatggnttggccctca 866 ||||| |||||||||||||| |||||||||||||| |||||||||| | || ||||||| Sbjct: 876 tcaattcaatcttgataggaagtagtaatctcaaacatgtttcatattgttt-gccctca 934 Query: 867 agggcagtcttccacccccttggtaagctctggtaacgatggcatcttggttgctg 922 | ||||||||| || ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 935 aaggcagtctt-caaccccttggttagctctggtaacgatggcatcttggttgctg 989 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6411 Number of Sequences: 1807 Number of extensions: 6411 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)