BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZG01FM1.SCF screened BAC_end
         (922 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig928                                                         1511   0.0  

>3x_Contig928 
          Length = 1948

 Score = 1511 bits (762), Expect = 0.0
 Identities = 822/836 (98%), Gaps = 5/836 (0%)
 Strand = Plus / Plus

                                                                       
Query: 88  agtgtatatttttatgatattacctatacaatactttctaaatgaacagcatagtcaata 147
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 agtgtatatttttatgatattacctatacaatactttctaaatgaacagcatagtcaata 217

                                                                       
Query: 148 gccatatccacggtatccccactctctatcctgtctggagttgaatcatttccaaatgtg 207
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gccatatccacggtatccccactctctatcctgtctggagttgaatcatttccaaatgtg 277

                                                                       
Query: 208 ataacgccatggttgacgctccagtcacgttctttagcgaacgcctccatctccttttca 267
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ataacgccatggttgacgctccagtcacgttctttagcgaacgcctccatctccttttca 337

                                                                       
Query: 268 ttctcgaagaatagtagagtcttagcgttgaacaatggtaaggagctatatgcttgttca 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttctcgaagaatagtagagtcttagcgttgaacaatggtaaggagctatatgcttgttca 397

                                                                       
Query: 328 gaattcaaagcaatttcctctcttatagcctctttcaaagtctttgtgaaaacattgaac 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gaattcaaagcaatttcctctcttatagcctctttcaaagtctttgtgaaaacattgaac 457

                                                                       
Query: 388 tcttcaaccttagaacctgtttgtaacagatcccaagccttttgataagaaccttccatc 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tcttcaaccttagaacctgtttgtaacagatcccaagccttttgataagaaccttccatc 517

                                                                       
Query: 448 aaaagtctttccaactttactggataagagaggtacgaactctcttccaaattcgtaacg 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaaagtctttccaactttactggataagagaggtacgaactctcttccaaattcgtaacg 577

                                                                       
Query: 508 tatctgctcaaaaactcaaattctgagtgaagtttagtgtaatcgttttgtgctagcaag 567
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tatctgctcaaaaactcaaattctgagtgaagtttagtgtaatcgttttgtgctagcaag 637

                                                                       
Query: 568 attaataagtacaaacttatcaacttgaacttgctatctgaatcactcaattctttcaca 627
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 attaataagtacaaacttatcaacttgaacttgctatctgaatcactcaattctttcaca 697

                                                                       
Query: 628 tcagaaaagtagaatgcgcttaactgtgagtaatagttcatgaaagtttcaaaatcctca 687
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcagaaaagtagaatgcgcttaactgtgagtaatagttcatgaaagtttcaaaatcctca 757

                                                                       
Query: 688 cagtatatgcttgaaagtgctcctatctcaagtatcttctttgctatattcagatcctgt 747
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 cagtatatgcttgaaagtgctcctatctcaagtatcttctttgctatattcagatcctgt 817

                                                                       
Query: 748 agatagctttgatttttccttagacgc-tttgatatcaggtattaacaattttgctttaa 806
           |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 818 agatagctttga-ttttccttag-cgcttttgatatcaggtattaacaattttgctttaa 875

                                                                       
Query: 807 tcaatncaatcttgataggagatagtaatctcaaacttgtttcatatggnttggccctca 866
           ||||| ||||||||||||||  |||||||||||||| |||||||||| | || |||||||
Sbjct: 876 tcaattcaatcttgataggaagtagtaatctcaaacatgtttcatattgttt-gccctca 934

                                                                   
Query: 867 agggcagtcttccacccccttggtaagctctggtaacgatggcatcttggttgctg 922
           | ||||||||| || ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 935 aaggcagtctt-caaccccttggttagctctggtaacgatggcatcttggttgctg 989


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6411
Number of Sequences: 1807
Number of extensions: 6411
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)