BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZG03FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig121 1154 0.0 3x_Contig796 101 2e-21 >3x_Contig121 Length = 884 Score = 1154 bits (582), Expect = 0.0 Identities = 600/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 85 tggtaagttaatacccaaacagctaattgaaaaggtcgacggaaaagctttcaatatcca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 tggtaagttaatacccaaacagctaattgaaaaggtcgacggaaaagctttcaatatcca 339 Query: 145 cccatctttgttaccgcgttaccgaggctcctccccgatccagtatacacttttgaacag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 cccatctttgttaccgcgttaccgaggctcctccccgatccagtatacacttttgaacag 399 Query: 205 agatgagtttacaggtgtgacgattcagagtttacatccaacgaaattcgaccatggaga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 agatgagtttacaggtgtgacgattcagagtttacatccaacgaaattcgaccatggaga 459 Query: 265 aatcatcaaacagacggctccgttgtcagtgcaagaaattttgaagcttggcaccgtcgg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 aatcatcaaacagacggctccgttgtcagtgcaagaaattttgaagcttggcaccgtcgg 519 Query: 325 taaatttgacgaggatgtccccgagaaggttgcaacacttatggatcaattgggattgaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 taaatttgacgaggatgtccccgagaaggttgcaacacttatggatcaattgggattgaa 579 Query: 385 aagtggtgaattgttgcaacagatgataagggaaagggatttcaaaccaaaaccgaaccc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 aagtggtgaattgttgcaacagatgataagggaaagggatttcaaaccaaaaccgaaccc 639 Query: 445 aaactatgaaccttcacttgctcccaaaataactactgaaatgaaacaaataaattggaa 504 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 aaactatgaactttcacttgctcccaaaataactactgaaatgaaacaaataaattggaa 699 Query: 505 aaacgaaaggaagttacggttattggccaagaatgatgccttagggtcgttgtactgcta 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 aaacgaaaggaagttacggttattggccaagaatgatgccttagggtcgttgtactgcta 759 Query: 565 taaattatcattaccaaagaggaagaaagaagttatgaagaaacgtattatattccccga 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 taaattatcattaccaaagaggaagaaagaagttatgaagaaacgtattatattccccga 819 Query: 625 attatttgatttgaatgaaacc-atatcaatgaaacctggagaatntaaattaagtgagg 683 ||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||| Sbjct: 820 attatttgatttgcatgaaacctatatcaatgaaacctggcgaatttaaattaagtgagg 879 Query: 684 acgag 688 ||||| Sbjct: 880 acgag 884 >3x_Contig796 Length = 2052 Score = 101 bits (51), Expect = 2e-21 Identities = 94/106 (88%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 789 ttaataaaagat-tggtaagatgaactccaatgaattctttatagggaggtcaaccagna 847 |||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| | Sbjct: 2052 ttaataaaagatgtggtaagatgaactccaatgagttcttataagggaggtcaaccagaa 1993 Query: 848 aaatatcataaaaatcata-tttcttcgttccattagatagttcgt 892 || ||||| ||||||||| ||||| |||||||| ||||||||||| Sbjct: 1992 aattatcaggaaaatcatagtttctacgttccataagatagttcgt 1947 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7213 Number of Sequences: 1807 Number of extensions: 7213 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 2 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)