BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZG12FM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1358                                                        1481   0.0  

>3x_Contig1358 
          Length = 7912

 Score = 1481 bits (747), Expect = 0.0
 Identities = 802/815 (98%), Gaps = 4/815 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tggcaacaacttcagttttatttggatccatgatcttgttcgacttacttagaggatttg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922  tggcaacaacttcagttttatttggatccatgatcttgttcgacttacttagaggatttg 981

                                                                        
Query: 147  ttctggatgtggctttccaaatcatctacacttttgctagtgaaagccctgattccaaaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  ttctggatgtggctttccaaatcatctacacttttgctagtgaaagccctgattccaaaa 1041

                                                                        
Query: 207  tgttcaagtttgctgtgcaggcattgtatgcattcagaatgcgccttaacgagtactctc 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 tgttcaagtttgctgtgcaggcattgtatgcattcagaatgcgccttaacgagtactctc 1101

                                                                        
Query: 267  cattctgtaagcgtttgctagacgagattccaggtttgcagactcaaccacaaattcaac 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 cattctgtaagcgtttgctagacgagattccaggtttgcagactcaaccacaaattcaac 1161

                                                                        
Query: 327  agattttgacagaatcagctgcaaatccaaacgtttcgattccagagcaaaaggctccag 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 agattttgacagaatcagctgcaaatccaaacgtttcgattccagagcaaaaggctccag 1221

                                                                        
Query: 387  ccttagtagagttgaattactttaacatcaatgaggtcatcagtccagtaacacaagagg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 ccttagtagagttgaattactttaacatcaatgaggtcatcagtccagtaacacaagagg 1281

                                                                        
Query: 447  ttccgcctagagaagttactgaggcaatcttattcaacgtaaacaacataacaatgagta 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 ttccgcctagagaagttactgaggcaatcttattcaacgtaaacaacataacaatgagta 1341

                                                                        
Query: 507  attttgacacgaagatcgtcgaattaaaagctcttttggaagaaaaatactaccaatggt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 attttgacacgaagatcgtcgaattaaaagctcttttggaagaaaaatactaccaatggt 1401

                                                                        
Query: 567  tctcgaattatttggtaaatcagagatccaaaactgaaccaaattatcatcccttatatg 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tctcgaattatttggtaaatcagagatccaaaactgaaccaaattatcatcccttatatg 1461

                                                                        
Query: 627  ctaaaatgttaaaaataatcgattcaaagactttacatgcatatatgttgaacttcacct 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 ctaaaatgttaaaaataatcgattcaaagactttacatgcatatatgttgaacttcacct 1521

                                                                        
Query: 687  attaacaattgtttattatgttgtcaactaaagaattgtgacaaactgaaaagactcaca 746
            || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1522 ataaacaattgtttattatgttgtcaactaaagaattgggacaaactgaaaagactcaca 1581

                                                                        
Query: 747  tgaaaaatttatccttatggttagggttcaattacgctttcttttgacataccaataaaa 806
            ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1582 tgaaaaatttatcctcatggtta-ggttcaattacgctttctcttgacataccaataaaa 1640

                                                                        
Query: 807  cattagcttattgcttttagagagcta-tgttagatgcccac-aaaatgata-gtttact 863
            ||| ||| ||||||||||||||||||| |||||||||||||| ||||||||| ||| |||
Sbjct: 1641 cataagcatattgcttttagagagctattgttagatgcccacaaaaatgataggttaact 1700

                                               
Query: 864  ggagttattccgtttgttgccaggaatataatgca 898
            | ||||||||||||||||||||||| |||||||||
Sbjct: 1701 gtagttattccgtttgttgccaggattataatgca 1735


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6706
Number of Sequences: 1807
Number of extensions: 6706
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)