BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZG12FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1358 1481 0.0 >3x_Contig1358 Length = 7912 Score = 1481 bits (747), Expect = 0.0 Identities = 802/815 (98%), Gaps = 4/815 (0%) Strand = Plus / Plus Query: 87 tggcaacaacttcagttttatttggatccatgatcttgttcgacttacttagaggatttg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 tggcaacaacttcagttttatttggatccatgatcttgttcgacttacttagaggatttg 981 Query: 147 ttctggatgtggctttccaaatcatctacacttttgctagtgaaagccctgattccaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 ttctggatgtggctttccaaatcatctacacttttgctagtgaaagccctgattccaaaa 1041 Query: 207 tgttcaagtttgctgtgcaggcattgtatgcattcagaatgcgccttaacgagtactctc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 tgttcaagtttgctgtgcaggcattgtatgcattcagaatgcgccttaacgagtactctc 1101 Query: 267 cattctgtaagcgtttgctagacgagattccaggtttgcagactcaaccacaaattcaac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 cattctgtaagcgtttgctagacgagattccaggtttgcagactcaaccacaaattcaac 1161 Query: 327 agattttgacagaatcagctgcaaatccaaacgtttcgattccagagcaaaaggctccag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 agattttgacagaatcagctgcaaatccaaacgtttcgattccagagcaaaaggctccag 1221 Query: 387 ccttagtagagttgaattactttaacatcaatgaggtcatcagtccagtaacacaagagg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 ccttagtagagttgaattactttaacatcaatgaggtcatcagtccagtaacacaagagg 1281 Query: 447 ttccgcctagagaagttactgaggcaatcttattcaacgtaaacaacataacaatgagta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 ttccgcctagagaagttactgaggcaatcttattcaacgtaaacaacataacaatgagta 1341 Query: 507 attttgacacgaagatcgtcgaattaaaagctcttttggaagaaaaatactaccaatggt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1342 attttgacacgaagatcgtcgaattaaaagctcttttggaagaaaaatactaccaatggt 1401 Query: 567 tctcgaattatttggtaaatcagagatccaaaactgaaccaaattatcatcccttatatg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 tctcgaattatttggtaaatcagagatccaaaactgaaccaaattatcatcccttatatg 1461 Query: 627 ctaaaatgttaaaaataatcgattcaaagactttacatgcatatatgttgaacttcacct 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1462 ctaaaatgttaaaaataatcgattcaaagactttacatgcatatatgttgaacttcacct 1521 Query: 687 attaacaattgtttattatgttgtcaactaaagaattgtgacaaactgaaaagactcaca 746 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1522 ataaacaattgtttattatgttgtcaactaaagaattgggacaaactgaaaagactcaca 1581 Query: 747 tgaaaaatttatccttatggttagggttcaattacgctttcttttgacataccaataaaa 806 ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1582 tgaaaaatttatcctcatggtta-ggttcaattacgctttctcttgacataccaataaaa 1640 Query: 807 cattagcttattgcttttagagagcta-tgttagatgcccac-aaaatgata-gtttact 863 ||| ||| ||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| Sbjct: 1641 cataagcatattgcttttagagagctattgttagatgcccacaaaaatgataggttaact 1700 Query: 864 ggagttattccgtttgttgccaggaatataatgca 898 | ||||||||||||||||||||||| ||||||||| Sbjct: 1701 gtagttattccgtttgttgccaggattataatgca 1735 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6706 Number of Sequences: 1807 Number of extensions: 6706 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)