BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC25ZG12RM1.SCF screened BAC_end
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1566 0.0
>3x_Contig1807
Length = 66587
Score = 1566 bits (790), Expect = 0.0
Identities = 846/858 (98%), Gaps = 5/858 (0%)
Strand = Plus / Plus
Query: 43 gctttatgaaagttacatcatttttggtaatccaccgtgacaccaaaggaattttttcca 102
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 36154 gctttatgaaagttacatcattcatggtaatccaccgtgacaccaaaggaattttttcca 36213
Query: 103 gtgatgtaatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttc 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36214 gtgatgtaatgcactggacaatggttcctaaaaaatagggcgattaaggcatttcctttc 36273
Query: 163 cagccttacaatggaatctgaagtaaaaagtttgtactccagatgttcaactcaataa-t 221
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 36274 cagccttacaatggaatctgaagtaaaaagtttgtactccagatgttcaacgcaataaat 36333
Query: 222 ggtcttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgtt 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36334 ggtcttaaatctttctgcaaaataaaactatgaattatgaacgaactgaaagcccttgtt 36393
Query: 282 gaagtcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctc 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36394 gaagtcttgtgatttgaaaacatcaggtgctacttttattgccttcacattttgttcctc 36453
Query: 342 ctaagataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacacca 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36454 ctaagataaactagcgaaggaatggatatcccaaccagtatcattccaaatcccacacca 36513
Query: 402 attgggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaattta 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36514 attgggagcccaagcggtgttttgtaaagggctgcaagtactataggggcaactaattta 36573
Query: 462 ccgacacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctata 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36574 ccgacacctgcaatagctcctataaacggcattaattgaaccttgacttggggatctata 36633
Query: 522 tacatagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgata 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36634 tacatagagaataatgccggtacacttgatcccataaaattatagcctaacattgtgata 36693
Query: 582 gacaatccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaat 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36694 gacaatccagcggtgaaaaagataccagagtttgtttttggcaatttgtcattggacaat 36753
Query: 642 gcctcggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcaaatatg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36754 gcctcggaagctccaatcatgaaagcttggcctattaaagcgacgaataatgcaaatatg 36813
Query: 702 gttaaagaaacttgattcctgtgtaatgtgttaatgtcacttttttgttcagactcttcc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36814 gttaaagaaacttgattcctgtgtaatgtgttaatgtcacttttttgttcagactcttcc 36873
Query: 762 ttctcaatcttatcgttggcactcgtgtctgtttcatcttgcgtgcttggagtatttaac 821
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 36874 ttctcaatcttatcgttgtcactcgtgtctgtttcatcttgcgtgctgggagtatttaac 36933
Query: 822 tttgcgaatagttttactaagtccggcgc-aaaaagctt-cagctacaccttacaccggc 879
||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||
Sbjct: 36934 tttgcgaatagttttactaagtccggcgcaaaaaagcttccagctacacctagca-cggc 36992
Query: 880 a-aaaccataaatgccac 896
| ||||||||||||||||
Sbjct: 36993 agaaaccataaatgccac 37010
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6367
Number of Sequences: 1807
Number of extensions: 6367
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)