BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZH02FM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1413 1616 0.0 >3x_Contig1413 Length = 8782 Score = 1616 bits (815), Expect = 0.0 Identities = 833/838 (99%), Gaps = 1/838 (0%) Strand = Plus / Minus Query: 87 ccattgatttactacagcttcgggcagtatatccttgaacttctcagtggagttgctcat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6703 ccattgatttactacagcttcgggcagtatatccttgaacttctcagtggagttgctcat 6644 Query: 147 tattgataaaattagttcataaagttgcactaaacgaatgcagacgatggacctgcataa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6643 tattgataaaattagttcataaagttgcactaaacgaatgcagacgatggacctgcataa 6584 Query: 207 tgccatagttactggtgattgttcaaatatgtacgttaagagttttggaaatactctttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6583 tgccatagttactggtgattgttcaaatatgtacgttaagagttttggaaatactctttg 6524 Query: 267 ccaaagagccgcatcgaccccatattcagattcacaaagtctgactaagatgttcgtctt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6523 ccaaagagccgcatcgaccccatattcagattcacaaagtctgactaagatgttcgtctt 6464 Query: 327 agatttcatggttaacttgacaagtctagacttttcggccacactaagcgattgcttctc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6463 agatttcatggttaacttgacaagtctagacttttcggccacactaagcgattgcttctc 6404 Query: 387 aggttctagcagttttggaatatcataagatgggagcatatcgatcaatcttgatccact 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6403 aggttctagcagttttggaatatcataagatgggagcatatcgatcaatcttgatccact 6344 Query: 447 ttccgctaccaaacgagaagaagatcttgagtgacctttatcatatgttgttgccttttg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6343 ttccgctaccaaacgagaagaagatcttgagtgacctttatcatatgttgttgccttttg 6284 Query: 507 catcaacgctttatcgaatttggaagtcaattgaagaatttgaattgctaatcggcggat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6283 catcaacgctttatcgaatttggaagtcaattgaagaatttgaattgctaatcggcggat 6224 Query: 567 agaagcatcggcgctgcagagaaagaataaaccgttgccttcgacatcttccacgacagt 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6223 agaagcatcggcgctgcagagaaagaataaaccgttgccttcgacatcttccacgacagt 6164 Query: 627 ttgggtatttttccattcaattttctctaattcatgataattcgcttccaaagttttggg 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6163 ttgggtatttttccattcaattttctctaattcatgataattcgcttccaaagttttggg 6104 Query: 687 gggcagtttcattccattgagagcggcatctgattctgattgttggatgtcgttcttagt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6103 gggcagtttcattccattgagagcggcatctgattctgattgttggatgtcgttcttagt 6044 Query: 747 aaaatcttcgagccagcattcaagcaattcgacgtatagtgcaagcaatgttctgtattc 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6043 aaaatcttcgagccagcattcaagcaattcgacgtatagtgcaagcaatgttctgtattc 5984 Query: 807 tgcggaagaaagataatac-agctataccttgattgtgtctttttatcgnaatcaaatga 865 ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct: 5983 tgcggaagaaagataatacaagctataccttgattgtgtcttttcatcgaaatcaaatga 5924 Query: 866 gtatttagcgaaccaagttattatggtgtagggattcttttgggcagctaatactttc 923 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 5923 gtatttagcgaaccaagttattagggtgtagggattctttttggcagctaatactttc 5866 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6401 Number of Sequences: 1807 Number of extensions: 6401 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)