BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZH04FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1627                                                        1511   0.0  

>3x_Contig1627 
          Length = 15708

 Score = 1511 bits (762), Expect = 0.0
 Identities = 819/832 (98%), Gaps = 6/832 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tggaattgggcaataatgatgctatatcaaaatgttctgcaagaa-aacctacatcgtct 144
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6773 tggaattgggcaataatgatgctatatcaaaatgttctgcaagaacaacctacatcgtct 6714

                                                                        
Query: 145  actatcggtactgttccaaagaaacaccgaattcttatccacattacaggattttgaaga 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6713 actatcggtactgttccaaagaaacaccgaattcttatccacattacaggattttgaaga 6654

                                                                        
Query: 205  ctttgaaaagctgcacaagtttgtagaagagtggaataaactattaaccccatacaaaca 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6653 ctttgaaaagctgcacaagtttgtagaagagtggaataaactattaaccccatacaaaca 6594

                                                                        
Query: 265  agtcctctccgcagcatctttcaacaatcttttgaccactattgtcaaagatgtttgtcc 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6593 agtcctctccgcagcatctttcaacaatcttttgaccactattgtcaaagatgtttgtcc 6534

                                                                        
Query: 325  aataatagagaacaagtttctatccctacaatttaacgaattaggttctatcaagattga 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6533 aataatagagaacaagtttctatccctacaatttaacgaattaggttctatcaagattga 6474

                                                                        
Query: 385  gaaacagctatccattgttatcaaaactataagcatggacaattatcaattacgtgagtg 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6473 gaaacagctatccattgttatcaaaactataagcatggacaattatcaattacgtgagtg 6414

                                                                        
Query: 445  gtttaagaagttaacccagatgtgtctcctcttaggatttgaagacgaccagtttgactc 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6413 gtttaagaagttaacccagatgtgtctcctcttaggatttgaagacgaccagtttgactc 6354

                                                                        
Query: 505  aagcactcaagatctaaaagatgacgtgctcaattcattgaactggttattgacatcttc 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6353 aagcactcaagatctaaaagatgacgtgctcaattcattgaactggttattgacatcttc 6294

                                                                        
Query: 565  tgaacgtatctcaataagacaacaacgtatcgacaaacggtagattggtgtcaacacata 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6293 tgaacgtatctcaataagacaacaacgtatcgacaaacggtagattggtgtcaacacata 6234

                                                                        
Query: 625  tataatatctgtagaggtctatagtgtcacatctctcttaacgtgtaatttatagtcaaa 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6233 tataatatctgtagaggtctatagtgtcacatctctcttaacgtgtaatttatagtcaaa 6174

                                                                        
Query: 685  ttcgttgtcactcttcacgagttgatctttctttttcttca-gttccatttttaccttga 743
            ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |
Sbjct: 6173 ttcgttgtcactcttcacgagttgatctttctttttcttcaggttccattttaacctgaa 6114

                                                                        
Query: 744  attaagaagttgaatatcacatttgttgatgnttaccatttgtctaaggtaggtcatcgg 803
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6113 attaagaagttgaatatcacatttgttgatgtttaccatttgtctaaggtaggtcatcgg 6054

                                                                        
Query: 804  caa-gcataaaagca--caatacctgtgtatcgcgatggatacggatcgtagcagtgtag 860
            ||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6053 caaggcataaaagcaacaaatacctgtgtatcgcgatggatacggatcgtagcagtgtag 5994

                                                                
Query: 861  gcataagtcctgccgagcataacgtaccgttggaagcat-taaacgcgatgc 911
            ||||||||||||||||||||| |||||||||||||||||  |||||||||||
Sbjct: 5993 gcataagtcctgccgagcatagcgtaccgttggaagcatcaaaacgcgatgc 5942


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6939
Number of Sequences: 1807
Number of extensions: 6939
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)