BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZH06FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1728 1572 0.0 >3x_Contig1728 Length = 20685 Score = 1572 bits (793), Expect = 0.0 Identities = 838/851 (98%), Gaps = 2/851 (0%) Strand = Plus / Minus Query: 86 ctttcttcaacgttgctgacgaacattgtgaatatggagaaagtgttgcaaattttgttg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13568 ctttcttcaacgttgctgacgaacattgtgaatatggagaaagtgttgcaaattttgttg 13509 Query: 146 cggagatactactaacgtcagatgataaagggaccattctcgagctgcttttgaatgcct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13508 cggagatactactaacgtcagatgataaagggaccattctcgagctgcttttgaatgcct 13449 Query: 206 tatacgacttcaggaacatgtttgacgcaggaaggatttacattgcttatggagttctct 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13448 tatacgacttcaggaacatgtttgacgcaggaaggatttacattgcttatggagttctct 13389 Query: 266 gtggtgtagaaaaattgaaagaaagagtttttgaaactagacacattgaaataatcagga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13388 gtggtgtagaaaaattgaaagaaagagtttttgaaactagacacattgaaataatcagga 13329 Query: 326 tgctgttcctgtgccggtgtgaagagaatatcttacaaactactattcaaagcatttact 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13328 tgctgttcctgtgccggtgtgaagagaatatcttacaaactactattcaaagcatttact 13269 Query: 386 tgaaatatatgctattttccaacttatctgctcctgaatttcttcaaacattagccatgc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13268 tgaaatatatgctattttccaacttatctgctcctgaatttcttcaaacattagccatgc 13209 Query: 446 atgtcaagagtgataacggctatgaatacatatccagaacaataggcagtttccgtgact 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13208 atgtcaagagtgataacggctatgaatacatatccagaacaataggcagtttccgtgact 13149 Query: 506 tttgtattgtcaactataatcaatctttagaaggatatgaagttccacaagacgcattgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13148 tttgtattgtcaactataatcaatctttagaaggatatgaagttccacaagacgcattgt 13089 Query: 566 accaagtacttgcctatgaattatttgattgtgagccttatgaaatctcggatcaatttt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13088 accaagtacttgcctatgaattatttgattgtgagccttatgaaatctcggatcaatttt 13029 Query: 626 tgattgagatcgtcaaagcagattgtaactattccgatttatcagaagaatattatgctt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13028 tgattgagatcgtcaaagcagattgtaactattccgatttatcagaagaatattatgctt 12969 Query: 686 tcttaactgagttagtgacaatggaaagtaataactacaaggaagctaaagtcattttgg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12968 tcttaactgagttagtgacaatggaaagtaataactacaaggaagctaaagtcattttgg 12909 Query: 746 acctaccacagtttacgccagctgtctacggtgccattaatcctctgccaatttttaaga 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12908 acctaccacagtttacgccagctgtctacggtgccattaatcctctgccaatttttaaga 12849 Query: 806 gcttgttctccgagtttttacctgataaattcgactcttttgtatcattgttttgataag 865 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 12848 gcttgttctccgagtttttacctgataaattcgacttttttgtatcattg-tttgataag 12790 Query: 866 gttatgtcaagttcttttcaga-caccatatncttttgaaatttgctttatttataccgc 924 |||||| |||| ||| ||||| |||||||| |||| |||||||||| ||||||||||| Sbjct: 12789 gttatgcaaagtccttctcagatcaccatatcctttgaaaatttgcttaatttataccgc 12730 Query: 925 atnatggggga 935 || || ||||| Sbjct: 12729 ataattgggga 12719 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6920 Number of Sequences: 1807 Number of extensions: 6920 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)