BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC25ZH08FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig226                                                         1501   0.0  

>3x_Contig226 
          Length = 1863

 Score = 1501 bits (757), Expect = 0.0
 Identities = 824/841 (97%), Gaps = 4/841 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   atttgtctatcttgatggacagaaagactaagaagccattgatcatttgctctagtgaag 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530  atttgtctatcttgatggacagaaagactaagaagccattgatcatttgctctagtgaag 589

                                                                        
Query: 147  gtggtatgaatatcgaagatgtggcaaagaccaacccagatgctatcaagaagttctacg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590  gtggtatgaatatcgaagatgtggcaaagaccaacccagatgctatcaagaagttctacg 649

                                                                        
Query: 207  tcgaagattccgttggattgaccccagaaactgctgctgagattgctgcctccttgggtt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650  tcgaagattccgttggattgaccccagaaactgctgctgagattgctgcctccttgggtt 709

                                                                        
Query: 267  tctccaaggaagccgaagctgatgctaaggatgcagtcttgaagttatataagatcttca 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710  tctccaaggaagccgaagctgatgctaaggatgcagtcttgaagttatataagatcttca 769

                                                                        
Query: 327  aggaaaaggatgctactcaaatcgaaattaacccattgagtgaagttcttgaccaggata 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770  aggaaaaggatgctactcaaatcgaaattaacccattgagtgaagttcttgaccaggata 829

                                                                        
Query: 387  agaaggtcatgtgtatggatgccaagttcggtttcgatgacaatgcctccttcagacaaa 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830  agaaggtcatgtgtatggatgccaagttcggtttcgatgacaatgcctccttcagacaaa 889

                                                                        
Query: 447  aagacgtgtactcatggagagatttgactcaagaagatccagatgaagttaccgccaaga 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890  aagacgtgtactcatggagagatttgactcaagaagatccagatgaagttaccgccaaga 949

                                                                        
Query: 507  agagtgacttgaactttgtcaagttaaagggtaatatcggttgtttggtcaacggtgccg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950  agagtgacttgaactttgtcaagttaaagggtaatatcggttgtttggtcaacggtgccg 1009

                                                                        
Query: 567  gtttagccatggccaccatggatgtcattaagttatatggtggtgatccagctaacttct 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 gtttagccatggccaccatggatgtcattaagttatatggtggtgatccagctaacttct 1069

                                                                        
Query: 627  tggattgtggtggtggtgccactccggaaactatcgaaactgctttcaagttgatcttgt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 tggattgtggtggtggtgccactccggaaactatcgaaactgctttcaagttgatcttgt 1129

                                                                        
Query: 687  ccaacgataacgtcgatgccatcttcgttaacattttcggtggtaatgtcagatgtgatt 746
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 1130 ccaacgataacgtcgatgccatcttcgttaacattttcggtggtattgtcagatgtga-t 1188

                                                                        
Query: 747  ttcgtcgctcaaggtctagtcgctgctaccaagaactttgtctgtcaaggtcccaattgt 806
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1189 ttcgtcgctcaaggtctagtcgctgctaccaagaac-ttgtctgtcaaggtcccaattgt 1247

                                                                        
Query: 807  tggctcgtctacaaggtaccaacttggtacaaggtagacgaaatattcgctgcattccgt 866
            | ||||||||||||||||||||||||| |||||||||||||| || |||||| || | ||
Sbjct: 1248 t-gctcgtctacaaggtaccaacttggaacaaggtagacgaatta-tcgctgaatccggt 1305

                                                                        
Query: 867  tttgagatctattcctttgacgaattggacccaactgctgaaaagttggttgagtttact 926
            ||  ||||||||||||| ||||||||||||||| ||||||||||| | |||||||| |||
Sbjct: 1306 ttgaagatctattccttcgacgaattggacccagctgctgaaaaggttgttgagttgact 1365

             
Query: 927  a 927
            |
Sbjct: 1366 a 1366


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6093
Number of Sequences: 1807
Number of extensions: 6093
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)