BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC25ZH10RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1310 0.0 >3x_Contig1762 Length = 22098 Score = 1310 bits (661), Expect = 0.0 Identities = 747/768 (97%), Gaps = 6/768 (0%) Strand = Plus / Minus Query: 48 tacgcgactttgttccatgcaaacttggatgagatggacgatccggatctaagccattac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12563 tacgcgactttgttccatgcaaacttggatgagatggacgatccggatctaagccattac 12504 Query: 108 gaaaatttat-acagttcttttaccgtaccattagacctgagacaagacctattgatttt 166 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12503 gaaaatttatcacagttcttttaccgtaccattagacctgagacaagacctattgatttt 12444 Query: 167 gacgagaacgttgttgtttgtccaagcgatgggacagttttacaattcggtattattgat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12443 gacgagaacgttgttgtttgtccaagcgatgggacagttttacaattcggtattattgat 12384 Query: 227 ccgcatctaggccacattgaacaggtcaagggaatgacttactcggtcaaagaatttttg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12383 ccgcatctaggccacattgaacaggtcaagggaatgacttactcggtcaaagaatttttg 12324 Query: 287 ggtacgcatggtcatcctctgttacagagaacaccatctgaagagaaactggggcaggat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12323 ggtacgcatggtcatcctctgttacagagaacaccatctgaagagaaactggggcaggat 12264 Query: 347 actaagactgataatgatcacagagaatttgcaagaatcaatgatatcccatacagtttg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12263 actaagactgataatgatcacagagaatttgcaagaatcaatgatatcccatacagtttg 12204 Query: 407 aacgatatcattggtcataccccaggttctcaaagtgaagaccatttacaacctttcgat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12203 aacgatatcattggtcataccccaggttctcaaagtgaagaccatttacaacctttcgat 12144 Query: 467 tataaaatggaaaagaaccaagccatctcagatcaagattcttccaagacttttacccta 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12143 tataaaatggaaaagaaccaagccatctcagatcaagattcttccaagacttttacccta 12084 Query: 527 ttgggtgagctatcccccaactatgtcaaacaaaaattatcttctaccgatacccagcta 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12083 ttgggtgagctatcccccaactatgtcaaacaaaaattatcttctaccgatacccagcta 12024 Query: 587 tattntgcggtcatttatttggctcctggtgattatcatcactaccattctccagtaaat 646 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12023 tattttgcggtcatttatttggctcctggtgattatcatcactaccattctccagtaaat 11964 Query: 647 tgggtttgcaaacttcgtcgtcatttcccaagtgagctctttttcgtggcacctttattt 706 |||||||||||||||||||||||||||||| |||||||||| | |||||||||| || Sbjct: 11963 tgggtttgcaaacttcgtcgtcatttcccaggtgagctcttctcggtggcaccttatttc 11904 Query: 707 cagagaaattttccaaacttgttttgttctc-atgaacgtgtttgcattgttaggttcac 765 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||| Sbjct: 11903 cagagaaatttcccaaacttg-tttgttctcaatgaacgtg-ttgcattgttagg-tcac 11847 Query: 766 tggaagcattgatttttttattatgaccccgttcggagcttcaaatgt 813 ||||||||| || || |||| ||||||||| |||||||| ||||||| Sbjct: 11846 tggaagcatgga-ttctttagtatgaccccagtcggagctacaaatgt 11800 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7687 Number of Sequences: 1807 Number of extensions: 7687 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)