BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZA10RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1799 1156 0.0 >3x_Contig1799 Length = 39855 Score = 1156 bits (583), Expect = 0.0 Identities = 626/635 (98%), Gaps = 4/635 (0%) Strand = Plus / Plus Query: 48 ggatagtctgacggcggatctgtggaaagctctaactaaagttgggttcattgtagtata 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24124 ggatagtctgacggcggatctgtggaaagctctaactaaagttgggttcattgtagtata 24183 Query: 108 ttgattattatttgtcctgtgtgaagtgatgcgacagtaaacagtttgttgtcctgattg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24184 ttgattattatttgtcctgtgtgaagtgatgcgacagtaaacagtttgttgtcctgattg 24243 Query: 168 tagcttgggacagttttgaagggaaattaggatatacgattaacaggtacattagaaggg 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24244 tagcttgggacagttttgaagggaaattaggatatacgattaacaggtacaaaagaaggg 24303 Query: 228 aaagcgctaaggtttcaagaagaatttaacggcatatataatcagtctttatatagtcat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24304 aaagcgctaaggtttcaagaagaatttaacggcatatataatcagtctttatatagtcat 24363 Query: 288 tccttttggagttgcatctgaaaagtgatgatactttgcacgtccctggggtatcagcgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24364 tccttttggagttgcatctgaaaagtgatgatactttgcacgtccctggggtatcagcgt 24423 Query: 348 ataattattatttgccggtattccaagtatagattgaattcaaatcataccaattgaaat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24424 ataattattatttgccggtattccaagtatagattgaattcaaatcataccaattgaaat 24483 Query: 408 ggaaatctcaccatattttcagctattctctgatttccactgtttatcttgtggaagtat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24484 ggaaatctcaccatattttcagctattctctgatttccactgtttatcttgtggaagtat 24543 Query: 468 atcctcttccaatggtgtgagataacaatcaaaatgtggtaccggctggggactccagaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24544 atcctcttccaatggtgtgagataacaatcaaaatgtggtaccggctggggactccagaa 24603 Query: 528 agtatgacaatcacccgcatacggaaagttatagaaacactttcctgttttctgtacata 587 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 24604 agtatgacaatcacccgcatacggaaagtaatagaaacactttcctgttttctgtacata 24663 Query: 588 tttccccgatatttccaaaccccaatatcatctacggtgtccctattttctcctaatgtt 647 ||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 24664 ttt-cccgataattccaaaccccaatatcatctacggtgtcccta-tttctcctaatgtt 24721 Query: 648 cccttcctatgggcttattatagaacagccaaaat 682 ||||||||| |||||||||||||||||| ||||| Sbjct: 24722 -ccttcctat-ggcttattatagaacagcgaaaat 24754 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6863 Number of Sequences: 1807 Number of extensions: 6863 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)