BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZB01RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1384 630 e-180 >3x_Contig1384 Length = 9372 Score = 630 bits (318), Expect = e-180 Identities = 392/414 (94%), Gaps = 2/414 (0%) Strand = Plus / Minus Query: 45 cttggcattttcgatagttattttcagggtaaagcttgaatggatacacttgaatggttg 104 |||||||||||||||||||||||||| | ||||||||||||| | || ||||||||||| Sbjct: 8070 cttggcattttcgatagttattttcaagtcaaagcttgaatggttccagttgaatggttg 8011 Query: 105 ttcgatattcatttagttgaagcgtaaataccgtcgccttgcgctcatggttccttaaat 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8010 ttcgatattcatttagttgaagcgtaaataccgtcgccttgcgctcatggttccttaaat 7951 Query: 165 tccgatttaaatagcttcacaacacaagctgcgattaattactttcaattagactacaaa 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7950 tccgatttaaatagcttcacaacacaagctgcgattaattactttcaattagactacaaa 7891 Query: 225 atatgaaaagaatgctagtatgttcgattacatgattgttagttcctgaagatgcataga 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7890 atatgaaaagaatgctagtatgttcgattacatgattgttagttcctgaagatgcataga 7831 Query: 285 tgatacgtgtctgtttgtgttggtattaaatcatcatgacaagaactagcaccaaaatct 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7830 tgatacgtgtctgtttgtgttggtattaaatcatcatgacaagaactagcaccaaaatct 7771 Query: 345 gaataattctattataaagtggtttattatgcatgtttgactctccgaatttttatttca 404 ||| |||||||| ||||||||||||| ||||| |||||||||| |||||| || |||| Sbjct: 7770 gaa-aattctataataaagtggttta-gatgcaagtttgactctttgaatttctaattca 7713 Query: 405 tgtttcattatttcatcattattacgtgacaatcctgtatctatgtctatacca 458 ||||||||||||||| ||| | || |||||||||||||||| | ||| |||||| Sbjct: 7712 tgtttcattatttcaacatcactatgtgacaatcctgtatcgaggtcgatacca 7659 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 37,893 Number of Sequences: 1807 Number of extensions: 37893 Number of successful extensions: 4303 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)