BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZB02RM1.SCF screened BAC_end
         (939 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1355                                                        1552   0.0  

>3x_Contig1355 
          Length = 8652

 Score = 1552 bits (783), Expect = 0.0
 Identities = 834/846 (98%), Gaps = 4/846 (0%)
 Strand = Plus / Plus

                                                                        
Query: 44   gcttccctttttgttaaggggagattttgcacgttggaaacgaaaatttctcactgaatt 103
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7186 gcttccctttttgttaaggggagactttgcacgttggaaacgaaaatttctcactgaatt 7245

                                                                        
Query: 104  gatggagagctgaaaaaaatgtgaaataacaaaatgtgcaaaatataatgtttgatacgg 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7246 gatggagagctgaaaaaaatgtgaaataacaaaatgtgcaaaatataatgtttgatacgg 7305

                                                                        
Query: 164  acatactgatgcactagattggaaattcaggtgcatagtaaaaccctacttcactctggt 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7306 acatactgatgcactagattggaaattcaggtgcatagtaaaaccctacttcactctggt 7365

                                                                        
Query: 224  attgtcataacccaagtgctcattgaaatatagtgttacaacgattcaattgtgttatcg 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7366 attgtcataacccaagtgctcattgaaatatagtgttacaacgattcaattgtgttatcg 7425

                                                                        
Query: 284  tgtttacgctggtgttgaaaaaaccaagtacgttgatcattttgcgttcttagttaatca 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7426 tgtttacgctggtgttgaaaaaaccaagtacgttgatcattttgcgttcttagttaatca 7485

                                                                        
Query: 344  ctggtttttatcagactttgatttgacactatttgtaattaaagacaataatatatcttc 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7486 ctggtttttatcagactttgatttgacactatttgtaattaaagacaataatatatcttc 7545

                                                                        
Query: 404  aacagcaatttgtaattttaatttctgttgacaaaaacacaatcgattatagtctcactt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7546 aacagcaatttgtaattttaatttctgttgacaaaaacacaatcgattatagtctcactt 7605

                                                                        
Query: 464  cattttggcataatctttgtcagaagttggataataatcattttccttataataatctgt 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7606 cattttggcataatctttgtcagaagttggataataatcattttccttataataatctgt 7665

                                                                        
Query: 524  cctgtttggattcttaagtgctggtttatgggtacttgtattcatttgtaaattcaacca 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 cctgtttggattcttaagtgctggtttatgggtacttgtattcatttgtaaattcaacca 7725

                                                                        
Query: 584  ctcaagacaaaccacagtgcgagagaaagaagaggtcaactatgaatccacaaccgaaag 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7726 ctcaagacaaaccacagtgcgagagaaagaagaggtcaactatgaatccacaaccgaaag 7785

                                                                        
Query: 644  aaactaatcgaagctccatctcctcgggagcaagaaacagtgctggcagtgcttcttcaa 703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7786 aaactaatcgaagctccatctcctcgggagcaagaaacagtgctggcagtgcttcttcaa 7845

                                                                        
Query: 704  ataacagtatctcaagt-aaaatagcggtagggagttac-accacgaagcgataccgata 761
            ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7846 ataacagtatctcaagtaaaaatagcggtagggagttacaaccacgaagcgataccgata 7905

                                                                        
Query: 762  gcgaatggcaagacgttggtatgcccacttttaaagaggactatttcatagatgcaatta 821
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7906 gcgaatggcaagacgttggtatgcccacttttaaagaggactattccatagatgcaatta 7965

                                                                        
Query: 822  cgaagaaggtaaaacttggaaaaaaaggtttncattcttgctatagttcgggatgcttgg 881
            |||||||||| |||| ||| ||||| ||||| ||||| |||||||||||| ||||| |||
Sbjct: 7966 cgaagaaggtgaaacctgggaaaaagggtttccattc-tgctatagttcgtgatgc-tgg 8023

                  
Query: 882  atcatt 887
            ||||||
Sbjct: 8024 atcatt 8029


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8012
Number of Sequences: 1807
Number of extensions: 8012
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)