BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZC07FM1.SCF screened BAC_end
         (921 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig870                                                         1435   0.0  

>3x_Contig870 
          Length = 2443

 Score = 1435 bits (724), Expect = 0.0
 Identities = 777/787 (98%), Gaps = 7/787 (0%)
 Strand = Plus / Minus

                                                                        
Query: 94   tcttcagacggctcatctacaaggattttctcccataatctcataccaatcaggtcagac 153
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 tcttcagacggctcatctacaaggattttctcccataatctcataccaatcaggtcagac 2384

                                                                        
Query: 154  tcatgcgtaatgccaccatgggaggtgtgctcgtctagtcttattgttgctaataactgg 213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2383 tcatgcgtaatgccaccatgggaggtgtgctcgtctagtcttattgttgctaataactgg 2324

                                                                        
Query: 214  aaaccgttggcagctttgatgacttcacctctagatggaatggatatttctcttttttca 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 aaaccgttggcagctttgatgacttcacctctagatggaatggatatttctcttttttca 2264

                                                                        
Query: 274  agaa--gggta-agaagaaca-gacaa-gacttcggttggcgctttgttgatatcctcga 328
            |||   ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2263 agacacgggtacagaagaacacgacaacgacttcggttggcgctttgttgatatcctcga 2204

                                                                        
Query: 329  taagtacccatcgtccctctttaactgctgttgtgagaacaccggatctccattcaaaag 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 taagtacccatcgtccctctttaactgctgttgtgagaacaccggatctccattcaaaag 2144

                                                                        
Query: 389  aaccgggtttttcacctgatgtatatgtacccaaaagtagtttagcatcagtttgttcac 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 aaccgggtttttcacctgatgtatatgtacccaaaagtagtttagcatcagtttgttcac 2084

                                                                        
Query: 449  ctaaatgaattttgacaacagaactatcgcagttcattttttttgaaagctcattgatca 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 ctaaatgaattttgacaacagaactatcgcagttcattttttttgaaagctcattgatca 2024

                                                                        
Query: 509  aaaatgttttacctgatccagccttacccacaagcattacaggcttgttgcgctgaatac 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2023 aaaatgttttacctgatccagccttacccacaagcattacaggcttgttgcgctgaatac 1964

                                                                        
Query: 569  cttcggccaatttttgtaaggccaacttggcaccatccgtatatactagatctgacttta 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1963 cttcggccaatttttgtaaggccaacttggcaccatccgtatatactagatctgacttta 1904

                                                                        
Query: 629  gatgttcttcattagaaagtgcttcggagattctggcaataaatacaccacatacttcaa 688
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1903 gatgttcttcattagaaggtgcttcggagattctggcaataaatacaccacatacttcaa 1844

                                                                        
Query: 689  caatcaacgacgaaagttcattgatatcgatgttgaacgattttccagttggtctgaagt 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1843 caatcaacgacgaaagttcattgatatcgatgttgaacgattttccagttggtctgaagt 1784

                                                                        
Query: 749  tctttggataagaaacaagttcattgatttcatttggtaagactatggtaatttgagaag 808
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 1783 tctttggataagaaacaagttcattgatttcatttggt-agactatggtaatttgag-ag 1726

                                                                        
Query: 809  ccttttagcttcagtaagttccaaaaattgattatctacatcggaagcaccttcaaatac 868
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1725 ccttttagcttcagtaagttccaaaaattgataatctacatcggaagcaccttcaaatac 1666

                   
Query: 869  acttaag 875
            |||||||
Sbjct: 1665 acttaag 1659


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7283
Number of Sequences: 1807
Number of extensions: 7283
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)