BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZC07FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig870 1435 0.0 >3x_Contig870 Length = 2443 Score = 1435 bits (724), Expect = 0.0 Identities = 777/787 (98%), Gaps = 7/787 (0%) Strand = Plus / Minus Query: 94 tcttcagacggctcatctacaaggattttctcccataatctcataccaatcaggtcagac 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2443 tcttcagacggctcatctacaaggattttctcccataatctcataccaatcaggtcagac 2384 Query: 154 tcatgcgtaatgccaccatgggaggtgtgctcgtctagtcttattgttgctaataactgg 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2383 tcatgcgtaatgccaccatgggaggtgtgctcgtctagtcttattgttgctaataactgg 2324 Query: 214 aaaccgttggcagctttgatgacttcacctctagatggaatggatatttctcttttttca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2323 aaaccgttggcagctttgatgacttcacctctagatggaatggatatttctcttttttca 2264 Query: 274 agaa--gggta-agaagaaca-gacaa-gacttcggttggcgctttgttgatatcctcga 328 ||| ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2263 agacacgggtacagaagaacacgacaacgacttcggttggcgctttgttgatatcctcga 2204 Query: 329 taagtacccatcgtccctctttaactgctgttgtgagaacaccggatctccattcaaaag 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2203 taagtacccatcgtccctctttaactgctgttgtgagaacaccggatctccattcaaaag 2144 Query: 389 aaccgggtttttcacctgatgtatatgtacccaaaagtagtttagcatcagtttgttcac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2143 aaccgggtttttcacctgatgtatatgtacccaaaagtagtttagcatcagtttgttcac 2084 Query: 449 ctaaatgaattttgacaacagaactatcgcagttcattttttttgaaagctcattgatca 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2083 ctaaatgaattttgacaacagaactatcgcagttcattttttttgaaagctcattgatca 2024 Query: 509 aaaatgttttacctgatccagccttacccacaagcattacaggcttgttgcgctgaatac 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2023 aaaatgttttacctgatccagccttacccacaagcattacaggcttgttgcgctgaatac 1964 Query: 569 cttcggccaatttttgtaaggccaacttggcaccatccgtatatactagatctgacttta 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1963 cttcggccaatttttgtaaggccaacttggcaccatccgtatatactagatctgacttta 1904 Query: 629 gatgttcttcattagaaagtgcttcggagattctggcaataaatacaccacatacttcaa 688 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1903 gatgttcttcattagaaggtgcttcggagattctggcaataaatacaccacatacttcaa 1844 Query: 689 caatcaacgacgaaagttcattgatatcgatgttgaacgattttccagttggtctgaagt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1843 caatcaacgacgaaagttcattgatatcgatgttgaacgattttccagttggtctgaagt 1784 Query: 749 tctttggataagaaacaagttcattgatttcatttggtaagactatggtaatttgagaag 808 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 1783 tctttggataagaaacaagttcattgatttcatttggt-agactatggtaatttgag-ag 1726 Query: 809 ccttttagcttcagtaagttccaaaaattgattatctacatcggaagcaccttcaaatac 868 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1725 ccttttagcttcagtaagttccaaaaattgataatctacatcggaagcaccttcaaatac 1666 Query: 869 acttaag 875 ||||||| Sbjct: 1665 acttaag 1659 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7283 Number of Sequences: 1807 Number of extensions: 7283 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)