BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC26ZC07RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1712 1061 0.0 >3x_Contig1712 Length = 23668 Score = 1061 bits (535), Expect = 0.0 Identities = 629/654 (96%), Gaps = 6/654 (0%) Strand = Plus / Plus Query: 45 gctttggctcgttgaaaaactgtcttgtatttgtatgaagcaaaatccgttctgtcataa 104 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 10729 gctttggctcgttgaaaaactgccatgtatttgtatgaagcaaaatccgttctgtcataa 10788 Query: 105 taattatagtcacattttatataattatgaggcgttcttataaataacttctatttacgt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10789 taattatagtcacattttatataattatgaggcgttcttataaataacttctatttacgt 10848 Query: 165 aagaatacactaatcgtgtggggtttgatacatgttctgatgaggaactgaaatattttt 224 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 10849 aagaatacactaatcgtgtggggtttgatacatgttctgatgaggaactgaaagaacagt 10908 Query: 225 attttatagttggccaatagacttttccaaagcatcgacaaagatgtcagcatgcttttc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10909 attttatagttggccaatagacttttccaaagcatcgacaaagatgtcagcatgcttttc 10968 Query: 285 ttcgaaagttaaggatggtcttagtctaacagacttttcagcacaaccaccgacgttgca 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10969 ttcgaaagttaaggatggtcttagtctaacagacttttcagcacaaccaccgacgttgca 11028 Query: 345 gccattgctcttcaagagcttcaatagctggtctctttcagccgaagtttccaaatcaaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11029 gccattgctcttcaagagcttcaatagctggtctctttcagccgaagtttccaaatcaaa 11088 Query: 405 agcgataaatgtaccacggttcttacctctcaagttgatcaatctggttgggtattttgc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11089 agcgataaatgtaccacggttcttacctctcaagttgatcaatctggttgggtattttgc 11148 Query: 465 ttgcaatttttccaacttttcgaacaagtaatcaccgacacgagcacattgatctaccaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11149 ttgcaatttttccaacttttcgaacaagtaatcaccgacacgagcacattgatctaccaa 11208 Query: 525 gtttgtgtctacgatttcttgaccaatggcaccagcaataattattttagctggatcacc 584 ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 11209 gttgttgtctacgatttcttgaccaatggcaccagcaataatcattctagctggatcacc 11268 Query: 585 acaccaggtgtttgaaattgtctgtaacgccttattaggaatgaattttgtcttcgtgga 644 |||||||||||| |||||||||||| ||||||||||||||||| | |||| ||||||| Sbjct: 11269 acaccaggtgtt--gaattgtctgtaa-gccttattaggaatgaa-tctgtcatcgtgga 11324 Query: 645 accagtaacccaccggtttggaacttctttggataaagtgacccaattaactgg 698 |||||||| ||| ||| |||||||||| ||||| ||||||||| ||| |||||| Sbjct: 11325 accagtaa-ccagcggattggaacttc-ttggagaaagtgaccaaatcaactgg 11376 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9858 Number of Sequences: 1807 Number of extensions: 9858 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)