BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZD01FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1693                                                        1281   0.0  

>3x_Contig1693 
          Length = 15531

 Score = 1281 bits (646), Expect = 0.0
 Identities = 711/725 (98%), Gaps = 6/725 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tattccacatcatacccttgaaaacttggtggcaccggcgttagatgaaggtgtgactat 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8077 tattccacatcatacccttgaaaacttggtggcaccggcgttagatgaaggtgtgactat 8136

                                                                        
Query: 147  tgtaaatgatgattctactgacttggagtcggtggaaatgatttattcgagaagaccttc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8137 tgtaaatgatgattctactgacttggagtcggtggaaatgatttattcgagaagaccttc 8196

                                                                        
Query: 207  cactatcggattggacatggcattgggcaggacaaggaccaattcatcatcggatgctgc 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8197 cactatcggattggacatggcattgggcaggacaaggaccaattcatcatcggatgctgc 8256

                                                                        
Query: 267  cactttgagtgggaacaactcttctacaacaagactgatgaggaccaatagtgcctctca 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8257 cactttgagtgggaacaactcttctacaacaagactgatgaggaccaatagtgcctctca 8316

                                                                        
Query: 327  ggggtctggcctggaaaccagacctagggtgttacgtttttactcttacgccgatatgat 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8317 ggggtctggcctggaaaccagacctagggtgttacgtttttactcttacgccgatatgat 8376

                                                                        
Query: 387  atcggatgagaactcttcatatccaagaaggccttccataacacaatcgctttcgtcgac 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8377 atcggatgagaactcttcatatccaagaaggccttccataacacaatcgctttcgtcgac 8436

                                                                        
Query: 447  cttgttgagacaacaaggtgctggtacgcctacaggatttgatagccacagagcaggaaa 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8437 cttgttgagacaacaaggtgctggtacgcctacaggatttgatagccacagagcaggaaa 8496

                                                                        
Query: 507  ctctccttcaaatcagctgggttcaccagatttttctaatccattcttgaacaaccaggc 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8497 ctctccttcaaatcagctgggttcaccagatttttctaatccattcttgaacaaccaggc 8556

                                                                        
Query: 567  tatagctgctgcggtagctgcaaacggtgggaacagtggacagggtgttagtcccttgga 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8557 tatagctgctgcggtagctgcaaacggtgggaacagtggacagggtgttagtcccttgga 8616

                                                                        
Query: 627  at-acatag-anactttccaacgtttccatttcaccactggccgttgctacaagacatta 684
            || |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8617 atcacatagaaaactttccaacgtttccattccaccactggccgttgctacaagacatta 8676

                                                                        
Query: 685  ttcggggaattttcgcgtgccgttcccccaatactaattctacaaatggacatagactgg 744
            ||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||| 
Sbjct: 8677 ttcggggaa-tctcgcgtgccgttccccaaatactaatactacaaatggacatagactga 8735

                                                                        
Query: 745  atacttcccctttaatgatcccacataacccaaaatagtgcgtgtgttgccccaagagta 804
             |||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||
Sbjct: 8736 gtacttcccctttaatgatcccacataaccc-aaatagtgcgt-tgttg-cgcaagagta 8792

                 
Query: 805  acttt 809
            |||||
Sbjct: 8793 acttt 8797


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4763
Number of Sequences: 1807
Number of extensions: 4763
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)