BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC26ZD02RM1.SCF screened BAC_end
         (909 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1769                                                        1352   0.0  

>3x_Contig1769 
          Length = 25795

 Score = 1352 bits (682), Expect = 0.0
 Identities = 767/786 (97%), Gaps = 7/786 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    gctttgaagggccagtcagtacatctacagatgctatatgacgaactatccatattacaa 103
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 22913 gctttgaagggccagtcagtacaactacagatgctatatgacgaactatccatattacaa 22972

                                                                         
Query: 104   caactaaatcacccaaatattgtgagatttaaggattggtttgaatccaaggagaagttc 163
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22973 caactaaatcacccaaatattgtgagatttaaggattggtttgaatccaaggagaagttc 23032

                                                                         
Query: 164   tatattgttactcaattagctactggaggtgagctatttgatcgtatcttggaaattggg 223
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 23033 tatattgttactcaattagctactggaggtgagctatttgatcgtatcttggaaaagggg 23092

                                                                         
Query: 224   aaattttgcgaagttgatgcagtattcatcgtgaagcagattctacaaggtgttcaatat 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23093 aaattttgcgaagttgatgcagtattcatcgtgaagcagattctacaaggtgttcaatat 23152

                                                                         
Query: 284   ttgcatcagaggaatattgtgcatagagacttgaaaccggagaatattttgtatttgaat 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23153 ttgcatcagaggaatattgtgcatagagacttgaaaccggagaatattttgtatttgaat 23212

                                                                         
Query: 344   aaatcagatgattctcctttggtgataggtgatttcggtattgcgaaggaattgaaagat 403
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23213 aaatcagatgattctcctttggtgataggtgatttcggtattgcgaaggaattgaaagat 23272

                                                                         
Query: 404   gataatgaactaattcataaagcagcagggtctatgggttatgttgccccagaagtttta 463
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23273 gataatgaactaattcataaagcagcagggtctatgggttatgttgccccagaagtttta 23332

                                                                         
Query: 464   acatcttctggccacggtaaaccgtgtgacatttggtcaatcggtgttatcacgtacacg 523
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23333 acatcttctggccacggtaaaccgtgtgacatttggtcaatcggtgttatcacgtacacg 23392

                                                                         
Query: 524   ttgctatgtggatattctccatttttagctgaaagtgcggatggattcatcgaagaatgc 583
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23393 ttgctatgtggatattctccatttttagctgaaagtgcggatggattcatcgaagaatgc 23452

                                                                         
Query: 584   accagtggtcagtacccagtagtattccacaagccatactggatttacgtatctaagacc 643
             ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 23453 accagtggtcagtacccagtagtattccacaagccatactggaataacgtatctaagacc 23512

                                                                         
Query: 644   gc-aaagagtttatattatgggcattgacggtgagccc-aaaagaaggcctactgc-aca 700
             || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 23513 gcaaaagagttcatattatgggcattgacggtgagcccaaaaagaaggcctactgcaaca 23572

                                                                         
Query: 701   gatttgat-aatgatatttggatcacttctaccgaaaattc-accactgatttgcttcca 758
             |||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 23573 gatttgataaatgatatctggatcacttctaccgaaaaatcaaccactgatttgcttcca 23632

                                                                         
Query: 759   aaaatcccaaaaggtttccaatgctcgtaaggaattccgtgatgctgttggaaatcgtta 818
              ||||||  |||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23633 gaaatccgcaaaggttt-cgatgctcgtaaggaattccgtgatgctgtt-gaaatcgtta 23690

                   
Query: 819   aattaa 824
             ||||||
Sbjct: 23691 aattaa 23696


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7054
Number of Sequences: 1807
Number of extensions: 7054
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)